Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 snoU13.14-201ENST00000459372 104 ntBASIC1.9□□□□□ -2.11
USP6P35125 AC092991.1-201ENST00000477176 376 ntBASIC1.9□□□□□ -2.11
USP6P35125 SNORA14.1-201ENST00000516113 141 ntBASIC1.9□□□□□ -2.11
USP6P35125 RNU6-586P-201ENST00000517265 104 ntBASIC1.9□□□□□ -2.11
USP6P35125 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.9□□□□□ -2.11
USP6P35125 CENPUP1-201ENST00000526649 1202 ntBASIC1.9□□□□□ -2.11
USP6P35125 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.9□□□□□ -2.11
USP6P35125 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.9□□□□□ -2.11
USP6P35125 MIR4285-201ENST00000581001 85 ntBASIC1.9□□□□□ -2.11
USP6P35125 AC107304.1-201ENST00000604229 296 ntBASIC1.9□□□□□ -2.11
USP6P35125 MIR6078-201ENST00000611069 100 ntBASIC1.9□□□□□ -2.11
USP6P35125 AC008121.3-201ENST00000618726 433 ntBASIC1.9□□□□□ -2.11
USP6P35125 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.9□□□□□ -2.11
USP6P35125 AC099654.12-201ENST00000639868 649 ntBASIC1.9□□□□□ -2.11
USP6P35125 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
USP6P35125 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
USP6P35125 snoU2_19.1-201ENST00000362361 80 ntBASIC1.89□□□□□ -2.11
USP6P35125 RNU1-23P-201ENST00000363361 144 ntBASIC1.89□□□□□ -2.11
USP6P35125 SNORA6-201ENST00000384033 151 ntBASIC1.89□□□□□ -2.11
USP6P35125 RNU6-1222P-201ENST00000384615 107 ntBASIC1.89□□□□□ -2.11
USP6P35125 MIR598-201ENST00000384868 97 ntBASIC1.89□□□□□ -2.11
USP6P35125 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
USP6P35125 RPS29P13-201ENST00000402041 169 ntBASIC1.89□□□□□ -2.11
USP6P35125 RNU6-1245P-201ENST00000411130 106 ntBASIC1.89□□□□□ -2.11
USP6P35125 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
USP6P35125 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.89□□□□□ -2.11
USP6P35125 SNRPGP7-201ENST00000469016 106 ntBASIC1.89□□□□□ -2.11
USP6P35125 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.89□□□□□ -2.11
USP6P35125 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.89□□□□□ -2.11
USP6P35125 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
USP6P35125 RNU6-189P-201ENST00000516120 101 ntBASIC1.89□□□□□ -2.11
USP6P35125 COPS8P3-201ENST00000526024 482 ntBASIC1.89□□□□□ -2.11
USP6P35125 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.89□□□□□ -2.11
USP6P35125 IMMP1LP2-201ENST00000552954 492 ntBASIC1.89□□□□□ -2.11
USP6P35125 U4atac.1-201ENST00000618345 95 ntBASIC1.89□□□□□ -2.11
USP6P35125 AC090517.3-201ENST00000625170 141 ntBASIC1.89□□□□□ -2.11
USP6P35125 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
USP6P35125 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
USP6P35125 RNU6-1285P-201ENST00000363480 105 ntBASIC1.88□□□□□ -2.11
USP6P35125 RNU6-82P-201ENST00000363970 107 ntBASIC1.88□□□□□ -2.11
USP6P35125 SNORD73A-201ENST00000386062 65 ntBASIC1.88□□□□□ -2.11
USP6P35125 U3.40-201ENST00000408706 208 ntBASIC1.88□□□□□ -2.11
USP6P35125 AL117339.3-201ENST00000418733 162 ntBASIC1.88□□□□□ -2.11
USP6P35125 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.88□□□□□ -2.11
USP6P35125 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.88□□□□□ -2.11
USP6P35125 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.88□□□□□ -2.11
USP6P35125 AC018868.1-201ENST00000491307 315 ntBASIC1.88□□□□□ -2.11
USP6P35125 AK3P2-201ENST00000507976 429 ntBASIC1.88□□□□□ -2.11
USP6P35125 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.88□□□□□ -2.11
USP6P35125 RNU5F-2P-201ENST00000516066 82 ntBASIC1.88□□□□□ -2.11
USP6P35125 Y_RNA.675-201ENST00000516389 149 ntBASIC1.88□□□□□ -2.11
USP6P35125 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.88□□□□□ -2.11
USP6P35125 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.88□□□□□ -2.11
USP6P35125 AC118273.2-201ENST00000532092 465 ntBASIC1.88□□□□□ -2.11
USP6P35125 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.88□□□□□ -2.11
USP6P35125 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.88□□□□□ -2.11
USP6P35125 HMGB1P33-201ENST00000563485 527 ntBASIC1.88□□□□□ -2.11
USP6P35125 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.88□□□□□ -2.11
USP6P35125 AC092747.3-201ENST00000603769 301 ntBASIC1.88□□□□□ -2.11
USP6P35125 AC022202.1-201ENST00000613515 211 ntBASIC1.88□□□□□ -2.11
USP6P35125 AC063943.3-201ENST00000615562 356 ntBASIC1.88□□□□□ -2.11
USP6P35125 AC103705.1-201ENST00000619013 241 ntBASIC1.88□□□□□ -2.11
USP6P35125 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
USP6P35125 RNU1-22P-201ENST00000363334 158 ntBASIC1.87□□□□□ -2.11
USP6P35125 SNORD116-4-201ENST00000384733 96 ntBASIC1.87□□□□□ -2.11
USP6P35125 AL590002.1-201ENST00000406554 418 ntBASIC1.87□□□□□ -2.11
USP6P35125 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.87□□□□□ -2.11
USP6P35125 AC091885.1-201ENST00000506658 268 ntBASIC1.87□□□□□ -2.11
USP6P35125 RNU6-1281P-201ENST00000516223 105 ntBASIC1.87□□□□□ -2.11
USP6P35125 SNORA48.11-201ENST00000517015 89 ntBASIC1.87□□□□□ -2.11
USP6P35125 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.87□□□□□ -2.11
USP6P35125 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.87□□□□□ -2.11
USP6P35125 AC091135.1-201ENST00000585943 307 ntBASIC1.87□□□□□ -2.11
USP6P35125 BNIP3P16-201ENST00000589779 534 ntBASIC1.87□□□□□ -2.11
USP6P35125 AC245884.12-201ENST00000615364 59 ntBASIC1.87□□□□□ -2.11
USP6P35125 AL133216.2-202ENST00000634512 349 ntBASIC1.87□□□□□ -2.11
USP6P35125 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USP6P35125 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
USP6P35125 AL596028.1-201ENST00000326971 197 ntBASIC1.86□□□□□ -2.11
USP6P35125 RNU1-93P-201ENST00000364704 169 ntBASIC1.86□□□□□ -2.11
USP6P35125 RNA5SP363-201ENST00000365072 115 ntBASIC1.86□□□□□ -2.11
USP6P35125 SNORA25B-201ENST00000365507 128 ntBASIC1.86□□□□□ -2.11
USP6P35125 RNU6-43P-201ENST00000384302 107 ntBASIC1.86□□□□□ -2.11
USP6P35125 RNU6-1274P-201ENST00000384557 107 ntBASIC1.86□□□□□ -2.11
USP6P35125 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.86□□□□□ -2.11
USP6P35125 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.86□□□□□ -2.11
USP6P35125 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.86□□□□□ -2.11
USP6P35125 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.86□□□□□ -2.11
USP6P35125 RNU7-138P-201ENST00000459479 64 ntBASIC1.86□□□□□ -2.11
USP6P35125 RNU6-1223P-201ENST00000517124 104 ntBASIC1.86□□□□□ -2.11
USP6P35125 ELOCP5-201ENST00000604924 333 ntBASIC1.86□□□□□ -2.11
USP6P35125 AC004492.1-201ENST00000607036 742 ntBASIC1.86□□□□□ -2.11
USP6P35125 AC092807.2-201ENST00000609367 243 ntBASIC1.86□□□□□ -2.11
USP6P35125 AL121757.2-201ENST00000611223 313 ntBASIC1.86□□□□□ -2.11
USP6P35125 AL161423.1-201ENST00000613700 262 ntBASIC1.86□□□□□ -2.11
USP6P35125 Y_RNA.3-201ENST00000362331 103 ntBASIC1.85□□□□□ -2.11
USP6P35125 Y_RNA.38-201ENST00000362617 102 ntBASIC1.85□□□□□ -2.11
USP6P35125 RNU6-944P-201ENST00000364023 107 ntBASIC1.85□□□□□ -2.11
USP6P35125 AL030996.1-201ENST00000411430 235 ntBASIC1.85□□□□□ -2.11
USP6P35125 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms