Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.4□□□□□ -2.47
CLIP1P30622 AC243964.1-201ENST00000441814 261 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 AL606517.1-201ENST00000446914 387 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.4□□□□□ -2.47
CLIP1P30622 RPL37P6-201ENST00000460682 294 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.4□□□□□ -2.47
CLIP1P30622 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
CLIP1P30622 SNORA70.12-201ENST00000516084 153 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 RNU1-86P-201ENST00000516108 154 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 RNU1-107P-201ENST00000516617 154 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.4□□□□□ -2.47
CLIP1P30622 MTND4LP26-201ENST00000518144 282 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 MTND2P7-201ENST00000521337 640 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.4□□□□□ -2.47
CLIP1P30622 AC112693.2-201ENST00000556538 232 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 AC090615.1-201ENST00000577519 154 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 AL603839.4-201ENST00000624658 1005 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 AC119674.1-220ENST00000641502 1048 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 RNU6-534P-201ENST00000364877 106 ntBASIC-0.41□□□□□ -2.48
CLIP1P30622 MIR145-201ENST00000384967 88 ntBASIC-0.41□□□□□ -2.48
CLIP1P30622 MIR938-201ENST00000401216 83 ntBASIC-0.41□□□□□ -2.48
CLIP1P30622 AC016831.2-201ENST00000417179 352 ntBASIC-0.41□□□□□ -2.48
CLIP1P30622 RAC1P6-201ENST00000423911 575 ntBASIC-0.41□□□□□ -2.48
CLIP1P30622 AC010154.1-201ENST00000425857 269 ntBASIC-0.41□□□□□ -2.48
CLIP1P30622 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.41□□□□□ -2.48
CLIP1P30622 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.41□□□□□ -2.48
CLIP1P30622 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-0.41□□□□□ -2.48
CLIP1P30622 AC245047.8-201ENST00000456455 284 ntBASIC-0.41□□□□□ -2.48
CLIP1P30622 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.41□□□□□ -2.48
CLIP1P30622 AC104136.1-201ENST00000512969 394 ntBASIC-0.41□□□□□ -2.48
CLIP1P30622 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.41□□□□□ -2.48
CLIP1P30622 AC095057.3-201ENST00000567102 1157 ntBASIC-0.41□□□□□ -2.48
CLIP1P30622 AC023824.3-201ENST00000569003 562 ntBASIC-0.41□□□□□ -2.48
CLIP1P30622 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.41□□□□□ -2.48
CLIP1P30622 AC096586.1-201ENST00000610267 561 ntBASIC-0.41□□□□□ -2.48
CLIP1P30622 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.41□□□□□ -2.48
CLIP1P30622 MTND4P21-201ENST00000453886 1357 ntBASIC-0.41□□□□□ -2.48
CLIP1P30622 RNA5SP517-201ENST00000364724 117 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 RNU6-487P-201ENST00000365430 104 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 RNU6-46P-201ENST00000383860 107 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 RNU6-929P-201ENST00000384429 107 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 SNORA40.8-201ENST00000411034 126 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.42□□□□□ -2.48
CLIP1P30622 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-0.42□□□□□ -2.48
CLIP1P30622 RPL39P39-201ENST00000455840 151 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 AC022364.2-201ENST00000457963 554 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 RPS3AP17-201ENST00000472594 777 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 OR9P1P-201ENST00000496431 281 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC-0.42□□□□□ -2.48
CLIP1P30622 AC093809.1-201ENST00000509155 340 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 AC091874.1-201ENST00000511402 339 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 RNA5SP67-201ENST00000516422 131 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 SNORA31.19-201ENST00000517079 126 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 AC016256.1-201ENST00000547971 354 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 AL390208.1-201ENST00000605885 644 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 AC091946.2-201ENST00000606105 291 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 RNU6-94P-201ENST00000607728 107 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 AC008147.4-201ENST00000617570 1204 ntBASIC-0.42□□□□□ -2.48
CLIP1P30622 MIR18A-201ENST00000362310 71 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 SNORD32B-201ENST00000364460 84 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 MIR153-2-201ENST00000385225 87 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.43□□□□□ -2.48
CLIP1P30622 AL590084.2-201ENST00000401481 382 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 MTCO1P21-201ENST00000416634 589 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 MTND4LP11-201ENST00000422184 280 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 MTCO3P45-201ENST00000443036 613 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 AC026410.2-201ENST00000460281 156 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.43□□□□□ -2.48
CLIP1P30622 AC010469.2-201ENST00000496412 480 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.43□□□□□ -2.48
CLIP1P30622 HMGB1P28-201ENST00000507778 552 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 SNORA40.12-201ENST00000516329 111 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 RNA5SP135-201ENST00000517019 125 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 AC112187.2-201ENST00000604345 283 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 AL136317.1-201ENST00000612653 226 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 AC092656.1-203ENST00000624134 423 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.43□□□□□ -2.48
CLIP1P30622 MIR103A2-201ENST00000362154 78 ntBASIC-0.44□□□□□ -2.48
CLIP1P30622 RNU6-252P-201ENST00000363232 107 ntBASIC-0.44□□□□□ -2.48
CLIP1P30622 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.44□□□□□ -2.48
CLIP1P30622 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.44□□□□□ -2.48
CLIP1P30622 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.44□□□□□ -2.48
CLIP1P30622 MIR593-201ENST00000384856 100 ntBASIC-0.44□□□□□ -2.48
CLIP1P30622 MIR653-201ENST00000385279 96 ntBASIC-0.44□□□□□ -2.48
CLIP1P30622 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
CLIP1P30622 AL133264.1-201ENST00000407157 562 ntBASIC-0.44□□□□□ -2.48
CLIP1P30622 SNORD71-201ENST00000411292 86 ntBASIC-0.44□□□□□ -2.48
CLIP1P30622 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.44□□□□□ -2.48
CLIP1P30622 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.44□□□□□ -2.48
CLIP1P30622 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.44□□□□□ -2.48
CLIP1P30622 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.44□□□□□ -2.48
CLIP1P30622 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.44□□□□□ -2.48
CLIP1P30622 TMEM251P1-201ENST00000503717 318 ntBASIC-0.44□□□□□ -2.48
CLIP1P30622 AC110760.3-202ENST00000515177 371 ntBASIC-0.44□□□□□ -2.48
CLIP1P30622 AP002001.1-203ENST00000534002 267 ntBASIC-0.44□□□□□ -2.48
CLIP1P30622 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms