Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 Z98751.3-201ENST00000604447 521 ntBASIC1.76□□□□□ -2.13
PTPN6P29350 AC068944.2-201ENST00000610373 403 ntBASIC1.76□□□□□ -2.13
PTPN6P29350 AL121757.2-201ENST00000611223 313 ntBASIC1.76□□□□□ -2.13
PTPN6P29350 PCGEM1.1-201ENST00000613431 131 ntBASIC1.76□□□□□ -2.13
PTPN6P29350 AL359880.1-201ENST00000621879 266 ntBASIC1.76□□□□□ -2.13
PTPN6P29350 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.76□□□□□ -2.13
PTPN6P29350 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PTPN6P29350 AC245060.5-201ENST00000610778 3293 ntBASIC1.76□□□□□ -2.13
PTPN6P29350 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
PTPN6P29350 RNU6-23P-201ENST00000363283 107 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 RNU4-20P-201ENST00000365601 151 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 U8.13-201ENST00000390842 128 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 CALM2P3-201ENST00000400429 449 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 RNA5SP201-201ENST00000410316 124 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 EIF1AXP1-201ENST00000419267 435 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 RPL31P63-201ENST00000422565 375 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.75□□□□□ -2.13
PTPN6P29350 MTND3P16-201ENST00000452205 344 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.75□□□□□ -2.13
PTPN6P29350 RNU6-835P-201ENST00000516974 104 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.75□□□□□ -2.13
PTPN6P29350 AP005597.4-201ENST00000526762 229 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.75□□□□□ -2.13
PTPN6P29350 AC024909.2-201ENST00000553035 286 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 AL512360.1-201ENST00000555346 234 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.75□□□□□ -2.13
PTPN6P29350 AC092807.2-201ENST00000609367 243 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 AL353997.5-201ENST00000618886 171 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 AC048344.4-201ENST00000619744 527 ntBASIC1.75□□□□□ -2.13
PTPN6P29350 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.75□□□□□ -2.13
PTPN6P29350 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PTPN6P29350 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.75□□□□□ -2.13
PTPN6P29350 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PTPN6P29350 MTND4P23-201ENST00000447723 1363 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
PTPN6P29350 RNA5SP99-201ENST00000364020 114 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 SNORA36A-201ENST00000384221 132 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 RNU6-378P-201ENST00000384324 107 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 SNORA26.9-201ENST00000391322 122 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 MIR208B-201ENST00000401172 77 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 TIMM9P3-201ENST00000428659 274 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.74□□□□□ -2.13
PTPN6P29350 AC027575.1-201ENST00000481064 460 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 RPS29P11-201ENST00000496507 171 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 AC093534.1-201ENST00000504977 132 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PTPN6P29350 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.74□□□□□ -2.13
PTPN6P29350 AC008834.1-201ENST00000511612 175 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 Y_RNA.693-201ENST00000516641 110 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 AC104576.1-201ENST00000524225 88 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.74□□□□□ -2.13
PTPN6P29350 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.74□□□□□ -2.13
PTPN6P29350 AC110588.1-201ENST00000559699 137 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 MIR3198-2-201ENST00000577868 80 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 MIR5692C1-201ENST00000585309 91 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 AC012493.3-201ENST00000604494 112 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 AC064836.2-201ENST00000609491 462 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 SNORA43.4-201ENST00000629559 138 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 AL450472.1-202ENST00000637286 180 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.74□□□□□ -2.13
PTPN6P29350 RNU6-227P-201ENST00000362865 103 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 RNU6-438P-201ENST00000365561 103 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 MIR583-201ENST00000384846 75 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 RNU6-648P-201ENST00000410190 107 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 RNA5SP501-201ENST00000410990 112 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 AC009310.1-201ENST00000414414 451 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 MTCO3P41-201ENST00000414801 328 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 VN1R36P-201ENST00000414936 291 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.73□□□□□ -2.13
PTPN6P29350 MTATP6P26-201ENST00000445926 662 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.73□□□□□ -2.13
PTPN6P29350 HMGN2P23-201ENST00000456759 269 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 U8.21-201ENST00000459536 136 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 RNU6-1208P-201ENST00000459588 107 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 RPL9P9-202ENST00000466501 579 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 AC025465.4-201ENST00000513422 638 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.73□□□□□ -2.13
PTPN6P29350 EIF4A1P12-201ENST00000551910 141 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 AC103591.3-201ENST00000608684 209 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 AL136221.1-201ENST00000621449 509 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.73□□□□□ -2.13
PTPN6P29350 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
PTPN6P29350 CBX3P1-201ENST00000325243 554 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 RNU6-1329P-201ENST00000365664 107 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 EIF4E2P1-201ENST00000393781 255 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 RNU2-41P-201ENST00000410991 178 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.72□□□□□ -2.13
PTPN6P29350 AL445685.2-201ENST00000422551 342 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 AC012306.1-201ENST00000423267 114 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.72□□□□□ -2.13
PTPN6P29350 MTND3P9-201ENST00000429526 346 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 MRPS10P2-201ENST00000431226 381 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 SEPT14P3-201ENST00000439401 183 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 AL359672.1-201ENST00000442302 409 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 AL732372.2-207ENST00000445840 183 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 AL035666.1-201ENST00000446195 348 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 SEPT14P2-201ENST00000453405 183 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms