Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.41□□□□□ -1.86
VAMP1P23763 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.41□□□□□ -1.86
VAMP1P23763 AC091042.1-201ENST00000579213 173 ntBASIC3.41□□□□□ -1.86
VAMP1P23763 MIR4443-201ENST00000585052 53 ntBASIC3.41□□□□□ -1.86
VAMP1P23763 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.41□□□□□ -1.86
VAMP1P23763 uc_338.13-201ENST00000618243 179 ntBASIC3.41□□□□□ -1.86
VAMP1P23763 MIR7153-201ENST00000637758 57 ntBASIC3.41□□□□□ -1.86
VAMP1P23763 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VAMP1P23763 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.41□□□□□ -1.86
VAMP1P23763 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
VAMP1P23763 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
VAMP1P23763 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
VAMP1P23763 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.4□□□□□ -1.86
VAMP1P23763 Y_RNA.447-201ENST00000384184 113 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
VAMP1P23763 AL139095.1-201ENST00000404326 391 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 MIR1251-201ENST00000408552 70 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 U3.40-201ENST00000408706 208 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 RN7SKP229-201ENST00000410465 302 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 AC139712.2-201ENST00000424302 339 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 MRPS10P1-201ENST00000448483 130 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 RN7SL93P-201ENST00000463035 293 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 AP001486.1-201ENST00000463339 476 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 RPL21P129-201ENST00000491732 478 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 RPL29P14-201ENST00000495837 428 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 AC008953.1-201ENST00000497334 318 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.4□□□□□ -1.87
VAMP1P23763 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.4□□□□□ -1.87
VAMP1P23763 RNU2-12P-201ENST00000517216 168 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.4□□□□□ -1.87
VAMP1P23763 MIR3176-201ENST00000582210 90 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 AC012433.1-201ENST00000588916 398 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 MIR6729-201ENST00000618194 65 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.4□□□□□ -1.87
VAMP1P23763 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
VAMP1P23763 AC009487.4-201ENST00000624969 3585 ntBASIC3.4□□□□□ -1.87
VAMP1P23763 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VAMP1P23763 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.4□□□□□ -1.87
VAMP1P23763 RNU6-454P-201ENST00000364292 107 ntBASIC3.39□□□□□ -1.87
VAMP1P23763 EDDM3CP-201ENST00000415977 425 ntBASIC3.39□□□□□ -1.87
VAMP1P23763 AL357552.1-201ENST00000445254 415 ntBASIC3.39□□□□□ -1.87
VAMP1P23763 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.39□□□□□ -1.87
VAMP1P23763 RPL12P20-201ENST00000475538 479 ntBASIC3.39□□□□□ -1.87
VAMP1P23763 AC018868.1-201ENST00000491307 315 ntBASIC3.39□□□□□ -1.87
VAMP1P23763 RNU7-143P-201ENST00000516781 65 ntBASIC3.39□□□□□ -1.87
VAMP1P23763 AC027419.1-201ENST00000522976 328 ntBASIC3.39□□□□□ -1.87
VAMP1P23763 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.39□□□□□ -1.87
VAMP1P23763 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.39□□□□□ -1.87
VAMP1P23763 AC113403.1-201ENST00000604910 193 ntBASIC3.39□□□□□ -1.87
VAMP1P23763 AC096577.2-201ENST00000611455 153 ntBASIC3.39□□□□□ -1.87
VAMP1P23763 AC244205.2-202ENST00000635781 342 ntBASIC3.39□□□□□ -1.87
VAMP1P23763 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VAMP1P23763 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.39□□□□□ -1.87
VAMP1P23763 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VAMP1P23763 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.38□□□□□ -1.87
VAMP1P23763 SNORD115-3-201ENST00000363100 82 ntBASIC3.38□□□□□ -1.87
VAMP1P23763 RNA5SP507-201ENST00000363603 121 ntBASIC3.38□□□□□ -1.87
VAMP1P23763 SNORD27-201ENST00000363981 72 ntBASIC3.38□□□□□ -1.87
VAMP1P23763 Y_RNA.329-201ENST00000365209 107 ntBASIC3.38□□□□□ -1.87
VAMP1P23763 Y_RNA.478-201ENST00000384358 107 ntBASIC3.38□□□□□ -1.87
VAMP1P23763 MT-TG-201ENST00000387429 68 ntBASIC3.38□□□□□ -1.87
VAMP1P23763 SNORA11F-201ENST00000408237 128 ntBASIC3.38□□□□□ -1.87
VAMP1P23763 RPL19P1-201ENST00000411635 428 ntBASIC3.38□□□□□ -1.87
VAMP1P23763 AL157831.1-201ENST00000426134 473 ntBASIC3.38□□□□□ -1.87
VAMP1P23763 AC011998.1-201ENST00000433403 117 ntBASIC3.38□□□□□ -1.87
VAMP1P23763 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.38□□□□□ -1.87
VAMP1P23763 AL357134.1-201ENST00000445848 426 ntBASIC3.38□□□□□ -1.87
VAMP1P23763 RNU6-221P-201ENST00000459541 99 ntBASIC3.38□□□□□ -1.87
VAMP1P23763 RN7SL629P-201ENST00000489622 285 ntBASIC3.38□□□□□ -1.87
VAMP1P23763 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.38□□□□□ -1.87
VAMP1P23763 AC106785.1-201ENST00000565935 262 ntBASIC3.38□□□□□ -1.87
VAMP1P23763 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.38□□□□□ -1.87
VAMP1P23763 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
VAMP1P23763 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VAMP1P23763 Y_RNA.99-201ENST00000363138 105 ntBASIC3.37□□□□□ -1.87
VAMP1P23763 Y_RNA.332-201ENST00000365271 113 ntBASIC3.37□□□□□ -1.87
VAMP1P23763 Y_RNA.352-201ENST00000365439 102 ntBASIC3.37□□□□□ -1.87
VAMP1P23763 AL031003.1-201ENST00000404229 172 ntBASIC3.37□□□□□ -1.87
VAMP1P23763 RNU6-710P-201ENST00000410424 105 ntBASIC3.37□□□□□ -1.87
VAMP1P23763 AC109327.1-201ENST00000471666 403 ntBASIC3.37□□□□□ -1.87
VAMP1P23763 RN7SL271P-201ENST00000487601 295 ntBASIC3.37□□□□□ -1.87
VAMP1P23763 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.37□□□□□ -1.87
VAMP1P23763 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.37□□□□□ -1.87
VAMP1P23763 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.37□□□□□ -1.87
VAMP1P23763 NDUFA5P6-201ENST00000542110 379 ntBASIC3.37□□□□□ -1.87
VAMP1P23763 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.37□□□□□ -1.87
VAMP1P23763 MIR3145-201ENST00000580727 82 ntBASIC3.37□□□□□ -1.87
VAMP1P23763 MIR3128-201ENST00000581957 66 ntBASIC3.37□□□□□ -1.87
VAMP1P23763 U6.115-201ENST00000636045 103 ntBASIC3.37□□□□□ -1.87
VAMP1P23763 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.37□□□□□ -1.87
VAMP1P23763 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
VAMP1P23763 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.36□□□□□ -1.87
VAMP1P23763 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.36□□□□□ -1.87
VAMP1P23763 RNA5SP197-201ENST00000363357 119 ntBASIC3.36□□□□□ -1.87
VAMP1P23763 RNU6-271P-201ENST00000363858 105 ntBASIC3.36□□□□□ -1.87
VAMP1P23763 RNU6-1240P-201ENST00000365155 104 ntBASIC3.36□□□□□ -1.87
VAMP1P23763 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
VAMP1P23763 RNU6-160P-201ENST00000384591 107 ntBASIC3.36□□□□□ -1.87
VAMP1P23763 RNU2-48P-201ENST00000410694 191 ntBASIC3.36□□□□□ -1.87
VAMP1P23763 AC010531.2-201ENST00000465012 153 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms