Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 MRPS10P2-201ENST00000431226 381 ntBASIC1.91□□□□□ -2.1
VCLP18206 FTH1P25-201ENST00000447665 469 ntBASIC1.91□□□□□ -2.1
VCLP18206 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.91□□□□□ -2.1
VCLP18206 AC019235.1-201ENST00000503847 207 ntBASIC1.91□□□□□ -2.1
VCLP18206 RPL39P5-202ENST00000512505 151 ntBASIC1.91□□□□□ -2.1
VCLP18206 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.91□□□□□ -2.1
VCLP18206 AL157687.1-201ENST00000554853 619 ntBASIC1.91□□□□□ -2.1
VCLP18206 HMGB1P33-201ENST00000563485 527 ntBASIC1.91□□□□□ -2.1
VCLP18206 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.91□□□□□ -2.1
VCLP18206 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.91□□□□□ -2.1
VCLP18206 AL450472.1-202ENST00000637286 180 ntBASIC1.91□□□□□ -2.1
VCLP18206 OR4G1P-203ENST00000641984 1631 ntBASIC1.91□□□□□ -2.1
VCLP18206 SNORA8-201ENST00000384574 139 ntBASIC1.9□□□□□ -2.11
VCLP18206 MIR514A2-201ENST00000385131 88 ntBASIC1.9□□□□□ -2.11
VCLP18206 MIR514A3-201ENST00000385132 88 ntBASIC1.9□□□□□ -2.11
VCLP18206 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
VCLP18206 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
VCLP18206 RNU6-1068P-201ENST00000410958 103 ntBASIC1.9□□□□□ -2.11
VCLP18206 MTCO3P41-201ENST00000414801 328 ntBASIC1.9□□□□□ -2.11
VCLP18206 UBE2V1P4-201ENST00000425374 344 ntBASIC1.9□□□□□ -2.11
VCLP18206 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.9□□□□□ -2.11
VCLP18206 ERLEC1P1-201ENST00000433806 578 ntBASIC1.9□□□□□ -2.11
VCLP18206 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.9□□□□□ -2.11
VCLP18206 RNA5SP57-201ENST00000459463 123 ntBASIC1.9□□□□□ -2.11
VCLP18206 AC105313.1-201ENST00000509121 353 ntBASIC1.9□□□□□ -2.11
VCLP18206 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.9□□□□□ -2.11
VCLP18206 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.9□□□□□ -2.11
VCLP18206 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.9□□□□□ -2.11
VCLP18206 AC016256.1-201ENST00000547971 354 ntBASIC1.9□□□□□ -2.11
VCLP18206 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.9□□□□□ -2.11
VCLP18206 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.9□□□□□ -2.11
VCLP18206 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.9□□□□□ -2.11
VCLP18206 RPL17P51-201ENST00000605218 238 ntBASIC1.9□□□□□ -2.11
VCLP18206 AC080013.6-201ENST00000606185 215 ntBASIC1.9□□□□□ -2.11
VCLP18206 RNU6-89P-201ENST00000606519 100 ntBASIC1.9□□□□□ -2.11
VCLP18206 DISC2.1-201ENST00000612827 205 ntBASIC1.9□□□□□ -2.11
VCLP18206 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.9□□□□□ -2.11
VCLP18206 SNORA43.4-201ENST00000629559 138 ntBASIC1.9□□□□□ -2.11
VCLP18206 AC068137.3-201ENST00000639191 341 ntBASIC1.9□□□□□ -2.11
VCLP18206 AC121333.1-201ENST00000567488 2709 ntBASIC1.89□□□□□ -2.11
VCLP18206 Y_RNA.332-201ENST00000365271 113 ntBASIC1.89□□□□□ -2.11
VCLP18206 RNU6-483P-201ENST00000384088 108 ntBASIC1.89□□□□□ -2.11
VCLP18206 SNORA36A-201ENST00000384221 132 ntBASIC1.89□□□□□ -2.11
VCLP18206 MIR504-201ENST00000385065 83 ntBASIC1.89□□□□□ -2.11
VCLP18206 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.89□□□□□ -2.11
VCLP18206 RPL31P63-201ENST00000422565 375 ntBASIC1.89□□□□□ -2.11
VCLP18206 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.89□□□□□ -2.11
VCLP18206 MTND3P9-201ENST00000429526 346 ntBASIC1.89□□□□□ -2.11
VCLP18206 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.89□□□□□ -2.11
VCLP18206 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VCLP18206 AC021146.2-201ENST00000504736 556 ntBASIC1.89□□□□□ -2.11
VCLP18206 RNU5F-4P-201ENST00000516581 114 ntBASIC1.89□□□□□ -2.11
VCLP18206 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.89□□□□□ -2.11
VCLP18206 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
VCLP18206 SCOCP1-201ENST00000554676 349 ntBASIC1.89□□□□□ -2.11
VCLP18206 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
VCLP18206 AC005520.5-201ENST00000613926 164 ntBASIC1.89□□□□□ -2.11
VCLP18206 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VCLP18206 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.89□□□□□ -2.11
VCLP18206 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
VCLP18206 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
VCLP18206 RNU6-1317P-201ENST00000364582 104 ntBASIC1.88□□□□□ -2.11
VCLP18206 MIR450B-201ENST00000401182 78 ntBASIC1.88□□□□□ -2.11
VCLP18206 RNU2-41P-201ENST00000410991 178 ntBASIC1.88□□□□□ -2.11
VCLP18206 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.88□□□□□ -2.11
VCLP18206 AC123900.1-201ENST00000420390 96 ntBASIC1.88□□□□□ -2.11
VCLP18206 EIF4EP2-201ENST00000422816 654 ntBASIC1.88□□□□□ -2.11
VCLP18206 AL035666.1-201ENST00000446195 348 ntBASIC1.88□□□□□ -2.11
VCLP18206 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.88□□□□□ -2.11
VCLP18206 RNU6-506P-201ENST00000516553 94 ntBASIC1.88□□□□□ -2.11
VCLP18206 RNU6-314P-201ENST00000516574 104 ntBASIC1.88□□□□□ -2.11
VCLP18206 Y_RNA.704-201ENST00000516851 102 ntBASIC1.88□□□□□ -2.11
VCLP18206 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.88□□□□□ -2.11
VCLP18206 AC090517.1-201ENST00000569307 266 ntBASIC1.88□□□□□ -2.11
VCLP18206 AC100830.2-201ENST00000581636 240 ntBASIC1.88□□□□□ -2.11
VCLP18206 BNIP3P25-201ENST00000596023 559 ntBASIC1.88□□□□□ -2.11
VCLP18206 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.88□□□□□ -2.11
VCLP18206 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.88□□□□□ -2.11
VCLP18206 FER-210ENST00000628534 558 ntTSL 5 BASIC1.88□□□□□ -2.11
VCLP18206 AC099654.12-201ENST00000639868 649 ntBASIC1.88□□□□□ -2.11
VCLP18206 AC245060.5-201ENST00000610778 3293 ntBASIC1.88□□□□□ -2.11
VCLP18206 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
VCLP18206 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
VCLP18206 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.87□□□□□ -2.11
VCLP18206 LINC02555-201ENST00000563933 1951 ntBASIC1.87□□□□□ -2.11
VCLP18206 RNA5SP493-201ENST00000364115 91 ntBASIC1.87□□□□□ -2.11
VCLP18206 Y_RNA.372-201ENST00000365599 102 ntBASIC1.87□□□□□ -2.11
VCLP18206 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
VCLP18206 Y_RNA.436-201ENST00000384097 102 ntBASIC1.87□□□□□ -2.11
VCLP18206 RNU6-933P-201ENST00000384424 107 ntBASIC1.87□□□□□ -2.11
VCLP18206 RNU6-1093P-201ENST00000391194 107 ntBASIC1.87□□□□□ -2.11
VCLP18206 AL033519.2-201ENST00000403958 392 ntBASIC1.87□□□□□ -2.11
VCLP18206 AL590002.1-201ENST00000406554 418 ntBASIC1.87□□□□□ -2.11
VCLP18206 RNA5SP501-201ENST00000410990 112 ntBASIC1.87□□□□□ -2.11
VCLP18206 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.87□□□□□ -2.11
VCLP18206 MTND3P21-201ENST00000433774 331 ntBASIC1.87□□□□□ -2.11
VCLP18206 AMD1P1-201ENST00000457220 922 ntBASIC1.87□□□□□ -2.11
VCLP18206 RNU7-14P-201ENST00000459331 62 ntBASIC1.87□□□□□ -2.11
VCLP18206 RPS29P27-201ENST00000463711 170 ntBASIC1.87□□□□□ -2.11
VCLP18206 AC083904.1-201ENST00000487828 231 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms