Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD8P13378 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD8P13378 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD8P13378 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD8P13378 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.06□□□□□ -1.76
HOXD8P13378 RNU1-33P-201ENST00000364249 162 ntBASIC4.06□□□□□ -1.76
HOXD8P13378 RNA5SP267-201ENST00000364893 126 ntBASIC4.06□□□□□ -1.76
HOXD8P13378 RNU6-381P-201ENST00000391259 108 ntBASIC4.06□□□□□ -1.76
HOXD8P13378 CBX3P9-201ENST00000402326 552 ntBASIC4.06□□□□□ -1.76
HOXD8P13378 AL133475.1-201ENST00000404414 305 ntBASIC4.06□□□□□ -1.76
HOXD8P13378 RNA5SP306-201ENST00000411087 107 ntBASIC4.06□□□□□ -1.76
HOXD8P13378 YPEL5P1-201ENST00000419731 367 ntBASIC4.06□□□□□ -1.76
HOXD8P13378 BPY2DP-201ENST00000422208 265 ntBASIC4.06□□□□□ -1.76
HOXD8P13378 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXD8P13378 AC010409.1-201ENST00000487382 476 ntBASIC4.06□□□□□ -1.76
HOXD8P13378 VWA8P1-201ENST00000510889 176 ntBASIC4.06□□□□□ -1.76
HOXD8P13378 RNU1-117P-201ENST00000517041 158 ntBASIC4.06□□□□□ -1.76
HOXD8P13378 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXD8P13378 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXD8P13378 MIR4744-201ENST00000581563 82 ntBASIC4.06□□□□□ -1.76
HOXD8P13378 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXD8P13378 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD8P13378 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXD8P13378 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
HOXD8P13378 USP8P1-201ENST00000494673 3183 ntBASIC4.06□□□□□ -1.76
HOXD8P13378 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
HOXD8P13378 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
HOXD8P13378 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXD8P13378 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXD8P13378 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD8P13378 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD8P13378 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HOXD8P13378 RNU6-103P-201ENST00000363686 107 ntBASIC4.05□□□□□ -1.76
HOXD8P13378 Y_RNA.287-201ENST00000364853 94 ntBASIC4.05□□□□□ -1.76
HOXD8P13378 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXD8P13378 RPL31P41-201ENST00000477967 372 ntBASIC4.05□□□□□ -1.76
HOXD8P13378 RNU6-436P-201ENST00000516171 114 ntBASIC4.05□□□□□ -1.76
HOXD8P13378 RNU2-12P-201ENST00000517216 168 ntBASIC4.05□□□□□ -1.76
HOXD8P13378 AC008011.1-201ENST00000545989 227 ntBASIC4.05□□□□□ -1.76
HOXD8P13378 AC090616.3-201ENST00000582184 217 ntBASIC4.05□□□□□ -1.76
HOXD8P13378 AL034555.1-201ENST00000604816 211 ntBASIC4.05□□□□□ -1.76
HOXD8P13378 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXD8P13378 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD8P13378 MFSD8-236ENST00000641509 4050 ntBASIC4.05□□□□□ -1.76
HOXD8P13378 AF127577.6-201ENST00000623352 2191 ntBASIC4.04□□□□□ -1.76
HOXD8P13378 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
HOXD8P13378 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD8P13378 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD8P13378 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD8P13378 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD8P13378 SNORA8.3-201ENST00000384679 139 ntBASIC4.04□□□□□ -1.76
HOXD8P13378 CYCSP35-201ENST00000451978 304 ntBASIC4.04□□□□□ -1.76
HOXD8P13378 AL441985.1-201ENST00000457727 251 ntBASIC4.04□□□□□ -1.76
HOXD8P13378 RNA5SP310-201ENST00000459084 116 ntBASIC4.04□□□□□ -1.76
HOXD8P13378 TRBV12-2-201ENST00000489763 344 ntBASIC4.04□□□□□ -1.76
HOXD8P13378 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD8P13378 AC006445.2-201ENST00000510061 472 ntBASIC4.04□□□□□ -1.76
HOXD8P13378 AC021269.2-201ENST00000532318 330 ntBASIC4.04□□□□□ -1.76
HOXD8P13378 AP004242.1-201ENST00000533701 349 ntBASIC4.04□□□□□ -1.76
HOXD8P13378 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.04□□□□□ -1.76
HOXD8P13378 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD8P13378 MIR4431-201ENST00000579990 94 ntBASIC4.04□□□□□ -1.76
HOXD8P13378 AC134026.1-201ENST00000623249 2239 ntBASIC4.04□□□□□ -1.76
HOXD8P13378 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD8P13378 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD8P13378 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HOXD8P13378 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD8P13378 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD8P13378 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXD8P13378 AC018555.1-201ENST00000567548 1980 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD8P13378 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HOXD8P13378 AC010329.5-201ENST00000623497 2174 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD8P13378 RNU4-10P-201ENST00000364383 140 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 Y_RNA.261-201ENST00000364631 102 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 SNORD20-201ENST00000384550 80 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 SNORA1.3-201ENST00000384676 136 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXD8P13378 RNU6-578P-201ENST00000390980 103 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 SNORD37.2-201ENST00000391075 66 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 AC027124.2-201ENST00000428249 105 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD8P13378 RNU5F-2P-201ENST00000516066 82 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 RNU6-1007P-201ENST00000516586 107 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 SNORA70.18-201ENST00000516696 98 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 RNU6-971P-201ENST00000516920 106 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 DEFB131C-201ENST00000528817 165 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 HMGN2P15-201ENST00000585707 270 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 SNORD11B-201ENST00000607707 90 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 MIR7851-201ENST00000610611 160 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 AC013791.1-201ENST00000616619 62 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 AC018692.3-201ENST00000623929 123 ntBASIC4.03□□□□□ -1.76
HOXD8P13378 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD8P13378 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXD8P13378 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD8P13378 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD8P13378 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD8P13378 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms