Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 7SK.7-201ENST00000603504 247 ntBASIC1.1□□□□□ -2.23
COL11A1P12107 AC015540.1-201ENST00000615828 501 ntBASIC1.1□□□□□ -2.23
COL11A1P12107 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.1□□□□□ -2.23
COL11A1P12107 AC024940.5-201ENST00000622889 474 ntBASIC1.1□□□□□ -2.23
COL11A1P12107 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.1□□□□□ -2.23
COL11A1P12107 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.1□□□□□ -2.23
COL11A1P12107 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
COL11A1P12107 RNU6-25P-201ENST00000383873 107 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 RNU6-48P-201ENST00000384161 107 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 RNU6-16P-201ENST00000384385 107 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 RNU6-1215P-201ENST00000384441 102 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 RNU6-15P-201ENST00000384534 107 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 RNU6-658P-201ENST00000384606 106 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 RNU6-29P-201ENST00000384637 107 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 SNORD116-4-201ENST00000384733 96 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 AL356432.1-201ENST00000405809 419 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 RNU6-607P-201ENST00000411283 108 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 AL031779.1-201ENST00000415663 330 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 AL158823.1-201ENST00000418441 478 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.09□□□□□ -2.23
COL11A1P12107 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.09□□□□□ -2.23
COL11A1P12107 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.09□□□□□ -2.23
COL11A1P12107 USP9YP14-201ENST00000430663 563 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 AC015922.2-201ENST00000435593 184 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 RNU6-1132P-201ENST00000459214 107 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.09□□□□□ -2.23
COL11A1P12107 RBBP4P6-201ENST00000508098 202 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
COL11A1P12107 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.09□□□□□ -2.23
COL11A1P12107 AC112206.3-201ENST00000514578 389 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 AC107953.1-201ENST00000522216 297 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 MTND4P7-201ENST00000523876 130 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 SUB1P2-201ENST00000556401 297 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 MTND1P15-201ENST00000579262 949 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 MIR3973-201ENST00000579824 107 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 BNIP3P30-201ENST00000601184 574 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 AC078795.2-201ENST00000602835 1252 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 DPPA3P3-201ENST00000603842 430 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 AC005034.5-201ENST00000604219 466 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 AC007363.1-201ENST00000604736 620 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 RNU6-89P-201ENST00000606519 100 ntBASIC1.09□□□□□ -2.23
COL11A1P12107 RNA5SP62-201ENST00000363457 110 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
COL11A1P12107 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.08□□□□□ -2.24
COL11A1P12107 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.08□□□□□ -2.24
COL11A1P12107 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COL11A1P12107 AL441985.1-201ENST00000457727 251 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNU7-63P-201ENST00000459054 62 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RPL7P43-201ENST00000478876 753 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.08□□□□□ -2.24
COL11A1P12107 AC079140.5-201ENST00000507882 310 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNA5SP137-201ENST00000516833 135 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 CYCSP27-201ENST00000527643 293 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.08□□□□□ -2.24
COL11A1P12107 MIR4703-201ENST00000577728 79 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COL11A1P12107 AL121992.2-201ENST00000606262 256 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 AC109347.2-201ENST00000610220 349 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 AC007792.1-201ENST00000623023 402 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 AC068137.3-201ENST00000639191 341 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 AC099654.12-201ENST00000639868 649 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 ZNF680P1-201ENST00000436625 1469 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 Z75746.1-201ENST00000440243 2080 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNA5SP276-201ENST00000362580 94 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 SNORD3E-201ENST00000362899 217 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNA5SP457-201ENST00000363657 124 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNU5E-7P-201ENST00000365290 117 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNU6-996P-201ENST00000365438 107 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNU6-1127P-201ENST00000384580 107 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNU6-1179P-201ENST00000384667 107 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 MIR301A-201ENST00000385261 86 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNU6-1106P-201ENST00000390845 107 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 Y_RNA.582-201ENST00000391023 95 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNU6-550P-201ENST00000391057 101 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNU6-1158P-201ENST00000391167 107 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 BTF3L4P1-201ENST00000413813 468 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 MTCO1P21-201ENST00000416634 589 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 USP9YP18-201ENST00000425912 695 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.08□□□□□ -2.24
COL11A1P12107 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.08□□□□□ -2.24
COL11A1P12107 SCARNA18-201ENST00000459004 134 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RPS3AP17-201ENST00000472594 777 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 AC105313.1-201ENST00000509121 353 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 LRRC34P2-201ENST00000514850 553 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 SNORA25.11-201ENST00000515935 105 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNU6-720P-201ENST00000516363 108 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNU6-685P-201ENST00000517088 95 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 SNORA25.17-201ENST00000517184 124 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.08□□□□□ -2.24
COL11A1P12107 HMGB1P33-201ENST00000563485 527 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.08□□□□□ -2.24
COL11A1P12107 AL158032.1-201ENST00000605401 106 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 AL451064.1-201ENST00000607718 471 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 MIR6857-201ENST00000613267 93 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 AL354950.2-201ENST00000617939 290 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 AL157786.1-207ENST00000627771 695 ntBASIC1.08□□□□□ -2.24
COL11A1P12107 RNU4-75P-201ENST00000364621 146 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 RNU6-282P-201ENST00000365357 103 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 RNU6-393P-201ENST00000384475 107 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms