Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-1.38□□□□□ -2.63
TOP2AP11388 AC105036.1-201ENST00000566222 271 ntBASIC-1.38□□□□□ -2.63
TOP2AP11388 MIR3612-201ENST00000579753 87 ntBASIC-1.38□□□□□ -2.63
TOP2AP11388 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-1.38□□□□□ -2.63
TOP2AP11388 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-1.39□□□□□ -2.63
TOP2AP11388 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-1.39□□□□□ -2.63
TOP2AP11388 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-1.39□□□□□ -2.63
TOP2AP11388 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-1.39□□□□□ -2.63
TOP2AP11388 AC091885.1-201ENST00000506658 268 ntBASIC-1.39□□□□□ -2.63
TOP2AP11388 AC117525.1-201ENST00000515228 503 ntBASIC-1.39□□□□□ -2.63
TOP2AP11388 RNU7-129P-201ENST00000516128 62 ntBASIC-1.39□□□□□ -2.63
TOP2AP11388 RNU6-1308P-201ENST00000516817 103 ntBASIC-1.39□□□□□ -2.63
TOP2AP11388 RNA5SP291-201ENST00000517222 105 ntBASIC-1.39□□□□□ -2.63
TOP2AP11388 AC080078.2-201ENST00000603766 501 ntBASIC-1.39□□□□□ -2.63
TOP2AP11388 AC068792.1-201ENST00000621354 417 ntBASIC-1.39□□□□□ -2.63
TOP2AP11388 SCARNA4-202ENST00000625402 129 ntBASIC-1.39□□□□□ -2.63
TOP2AP11388 RNU6-652P-201ENST00000365488 107 ntBASIC-1.4□□□□□ -2.63
TOP2AP11388 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.4□□□□□ -2.63
TOP2AP11388 RNA5SP94-201ENST00000516917 108 ntBASIC-1.4□□□□□ -2.63
TOP2AP11388 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-1.4□□□□□ -2.63
TOP2AP11388 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-1.4□□□□□ -2.63
TOP2AP11388 AC093788.1-201ENST00000609356 927 ntBASIC-1.4□□□□□ -2.63
TOP2AP11388 MIR499B-201ENST00000636498 73 ntBASIC-1.4□□□□□ -2.63
TOP2AP11388 MTND5P33-201ENST00000571250 1450 ntBASIC-1.4□□□□□ -2.63
TOP2AP11388 RNU6-1019P-201ENST00000364424 107 ntBASIC-1.4□□□□□ -2.63
TOP2AP11388 Y_RNA.423-201ENST00000384057 113 ntBASIC-1.4□□□□□ -2.63
TOP2AP11388 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.4□□□□□ -2.63
TOP2AP11388 MTCO2P31-201ENST00000402702 684 ntBASIC-1.4□□□□□ -2.63
TOP2AP11388 AL953862.1-201ENST00000423016 168 ntBASIC-1.4□□□□□ -2.63
TOP2AP11388 RAC1P6-201ENST00000423911 575 ntBASIC-1.4□□□□□ -2.63
TOP2AP11388 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-1.4□□□□□ -2.63
TOP2AP11388 MIR378F-201ENST00000578143 78 ntBASIC-1.4□□□□□ -2.63
TOP2AP11388 RNU6-24P-201ENST00000384440 107 ntBASIC-1.41□□□□□ -2.64
TOP2AP11388 RNU2-3P-201ENST00000410144 191 ntBASIC-1.41□□□□□ -2.64
TOP2AP11388 AL353997.1-201ENST00000432936 108 ntBASIC-1.41□□□□□ -2.64
TOP2AP11388 NDUFA4P2-201ENST00000489989 244 ntBASIC-1.41□□□□□ -2.64
TOP2AP11388 RNU6-917P-201ENST00000516294 104 ntBASIC-1.41□□□□□ -2.64
TOP2AP11388 SNORA31.10-201ENST00000516482 106 ntBASIC-1.41□□□□□ -2.64
TOP2AP11388 RNU6-965P-201ENST00000516721 96 ntBASIC-1.41□□□□□ -2.64
TOP2AP11388 RNU6-678P-201ENST00000516832 109 ntBASIC-1.41□□□□□ -2.64
TOP2AP11388 POLR2KP1-201ENST00000553226 168 ntBASIC-1.41□□□□□ -2.64
TOP2AP11388 MIR5695-201ENST00000579717 85 ntBASIC-1.41□□□□□ -2.64
TOP2AP11388 AC246785.4-201ENST00000605374 287 ntBASIC-1.41□□□□□ -2.64
TOP2AP11388 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-1.42□□□□□ -2.64
TOP2AP11388 RNY4P16-201ENST00000364768 94 ntBASIC-1.42□□□□□ -2.64
TOP2AP11388 MIR514A1-201ENST00000385133 98 ntBASIC-1.42□□□□□ -2.64
TOP2AP11388 MIR1827-201ENST00000408549 66 ntBASIC-1.42□□□□□ -2.64
TOP2AP11388 ELOCP9-201ENST00000418624 239 ntBASIC-1.42□□□□□ -2.64
TOP2AP11388 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC-1.42□□□□□ -2.64
TOP2AP11388 AC002486.1-201ENST00000435098 391 ntBASIC-1.42□□□□□ -2.64
TOP2AP11388 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-1.42□□□□□ -2.64
TOP2AP11388 MTND2P24-201ENST00000453434 806 ntBASIC-1.42□□□□□ -2.64
TOP2AP11388 RPL39P39-201ENST00000455840 151 ntBASIC-1.42□□□□□ -2.64
TOP2AP11388 AC008628.1-201ENST00000508663 265 ntBASIC-1.42□□□□□ -2.64
TOP2AP11388 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-1.42□□□□□ -2.64
TOP2AP11388 AC093303.1-201ENST00000514549 295 ntBASIC-1.42□□□□□ -2.64
TOP2AP11388 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-1.42□□□□□ -2.64
TOP2AP11388 MIR4709-201ENST00000577272 72 ntBASIC-1.42□□□□□ -2.64
TOP2AP11388 AC112487.2-201ENST00000637950 304 ntBASIC-1.42□□□□□ -2.64
TOP2AP11388 MTCO2P1-201ENST00000424648 477 ntBASIC-1.43□□□□□ -2.64
TOP2AP11388 AC073910.1-201ENST00000445047 438 ntBASIC-1.43□□□□□ -2.64
TOP2AP11388 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-1.43□□□□□ -2.64
TOP2AP11388 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-1.43□□□□□ -2.64
TOP2AP11388 MIR4300-201ENST00000581016 96 ntBASIC-1.43□□□□□ -2.64
TOP2AP11388 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-1.43□□□□□ -2.64
TOP2AP11388 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.44□□□□□ -2.64
TOP2AP11388 RNU6-1297P-201ENST00000384415 104 ntBASIC-1.44□□□□□ -2.64
TOP2AP11388 AC123900.1-201ENST00000420390 96 ntBASIC-1.44□□□□□ -2.64
TOP2AP11388 AC133104.1-201ENST00000429100 218 ntBASIC-1.44□□□□□ -2.64
TOP2AP11388 RNU6-848P-201ENST00000515948 107 ntBASIC-1.44□□□□□ -2.64
TOP2AP11388 RNU6-617P-201ENST00000516147 107 ntBASIC-1.44□□□□□ -2.64
TOP2AP11388 RNU6-473P-201ENST00000516164 107 ntBASIC-1.44□□□□□ -2.64
TOP2AP11388 RNU6-1049P-201ENST00000516414 107 ntBASIC-1.44□□□□□ -2.64
TOP2AP11388 AC023050.3-201ENST00000541142 333 ntBASIC-1.44□□□□□ -2.64
TOP2AP11388 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-1.44□□□□□ -2.64
TOP2AP11388 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.45□□□□□ -2.64
TOP2AP11388 SNORD65-201ENST00000391079 73 ntBASIC-1.45□□□□□ -2.64
TOP2AP11388 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC-1.45□□□□□ -2.64
TOP2AP11388 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC-1.45□□□□□ -2.64
TOP2AP11388 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-1.45□□□□□ -2.64
TOP2AP11388 AC098483.2-201ENST00000603158 454 ntBASIC-1.45□□□□□ -2.64
TOP2AP11388 AC021851.1-201ENST00000608537 1082 ntBASIC-1.45□□□□□ -2.64
TOP2AP11388 SMIM11P1-201ENST00000369586 178 ntBASIC-1.45□□□□□ -2.64
TOP2AP11388 AC027644.1-201ENST00000419595 298 ntBASIC-1.45□□□□□ -2.64
TOP2AP11388 RNU1-131P-201ENST00000458943 161 ntBASIC-1.45□□□□□ -2.64
TOP2AP11388 AP003716.2-201ENST00000528260 108 ntBASIC-1.45□□□□□ -2.64
TOP2AP11388 AC093023.1-201ENST00000547375 507 ntBASIC-1.45□□□□□ -2.64
TOP2AP11388 AC068790.2-201ENST00000602601 557 ntBASIC-1.45□□□□□ -2.64
TOP2AP11388 MIR3976-201ENST00000606807 139 ntBASIC-1.45□□□□□ -2.64
TOP2AP11388 MIR1-1-201ENST00000362147 71 ntBASIC-1.46□□□□□ -2.64
TOP2AP11388 AC083799.1-201ENST00000366451 910 ntBASIC-1.46□□□□□ -2.64
TOP2AP11388 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-1.46□□□□□ -2.64
TOP2AP11388 AC069271.1-201ENST00000445577 156 ntBASIC-1.46□□□□□ -2.64
TOP2AP11388 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-1.46□□□□□ -2.64
TOP2AP11388 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.46□□□□□ -2.64
TOP2AP11388 AC004832.4-201ENST00000608952 331 ntBASIC-1.46□□□□□ -2.64
TOP2AP11388 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-1.46□□□□□ -2.64
TOP2AP11388 AC009269.6-201ENST00000621778 588 ntBASIC-1.46□□□□□ -2.64
TOP2AP11388 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-1.46□□□□□ -2.64
TOP2AP11388 RNU6-161P-201ENST00000363051 106 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms