Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHGAP10645 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.69□□□□□ -1.5
CHGAP10645 MIR367-201ENST00000362299 68 ntBASIC5.69□□□□□ -1.5
CHGAP10645 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHGAP10645 RNU2-49P-201ENST00000410666 184 ntBASIC5.69□□□□□ -1.5
CHGAP10645 RPS29P4-201ENST00000414733 161 ntBASIC5.69□□□□□ -1.5
CHGAP10645 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.69□□□□□ -1.5
CHGAP10645 RPS27P26-201ENST00000494583 239 ntBASIC5.69□□□□□ -1.5
CHGAP10645 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHGAP10645 MIR3922-201ENST00000585192 84 ntBASIC5.69□□□□□ -1.5
CHGAP10645 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC5.69□□□□□ -1.5
CHGAP10645 AC099778.2-201ENST00000610904 211 ntBASIC5.69□□□□□ -1.5
CHGAP10645 MIR6844-201ENST00000637122 62 ntBASIC5.69□□□□□ -1.5
CHGAP10645 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHGAP10645 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHGAP10645 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHGAP10645 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CHGAP10645 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHGAP10645 AL161912.2-201ENST00000565707 3007 ntBASIC5.69□□□□□ -1.5
CHGAP10645 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHGAP10645 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CHGAP10645 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC5.68□□□□□ -1.5
CHGAP10645 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHGAP10645 SNORD114-7-201ENST00000362520 77 ntBASIC5.68□□□□□ -1.5
CHGAP10645 MIR548B-201ENST00000385247 97 ntBASIC5.68□□□□□ -1.5
CHGAP10645 MT-TT-201ENST00000387460 66 ntBASIC5.68□□□□□ -1.5
CHGAP10645 RNA5SP103-201ENST00000459503 118 ntBASIC5.68□□□□□ -1.5
CHGAP10645 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.68□□□□□ -1.5
CHGAP10645 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.68□□□□□ -1.5
CHGAP10645 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC5.68□□□□□ -1.5
CHGAP10645 AC244505.7-201ENST00000599675 272 ntBASIC5.68□□□□□ -1.5
CHGAP10645 AC002076.2-201ENST00000617362 122 ntBASIC5.68□□□□□ -1.5
CHGAP10645 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHGAP10645 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CHGAP10645 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHGAP10645 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CHGAP10645 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.67□□□□□ -1.5
CHGAP10645 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHGAP10645 RNU6-1056P-201ENST00000383996 107 ntBASIC5.67□□□□□ -1.5
CHGAP10645 Y_RNA.563-201ENST00000384707 108 ntBASIC5.67□□□□□ -1.5
CHGAP10645 AC092991.1-201ENST00000477176 376 ntBASIC5.67□□□□□ -1.5
CHGAP10645 AC022695.1-201ENST00000522089 237 ntBASIC5.67□□□□□ -1.5
CHGAP10645 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.67□□□□□ -1.5
CHGAP10645 HOTTIP_4.1-201ENST00000618195 165 ntBASIC5.67□□□□□ -1.5
CHGAP10645 MIR7702-201ENST00000621931 59 ntBASIC5.67□□□□□ -1.5
CHGAP10645 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHGAP10645 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHGAP10645 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHGAP10645 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.67□□□□□ -1.5
CHGAP10645 AL136164.4-201ENST00000625013 2135 ntBASIC5.66□□□□□ -1.5
CHGAP10645 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.66□□□□□ -1.5
CHGAP10645 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHGAP10645 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.66□□□□□ -1.5
CHGAP10645 UBE3AP2-201ENST00000429033 2259 ntBASIC5.66□□□□□ -1.5
CHGAP10645 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHGAP10645 RPS27P1-201ENST00000450552 247 ntBASIC5.66□□□□□ -1.5
CHGAP10645 RNU6-659P-201ENST00000516454 104 ntBASIC5.66□□□□□ -1.5
CHGAP10645 HSPE1P18-201ENST00000517602 280 ntBASIC5.66□□□□□ -1.5
CHGAP10645 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.66□□□□□ -1.5
CHGAP10645 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHGAP10645 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CHGAP10645 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHGAP10645 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHGAP10645 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC5.65□□□□□ -1.5
CHGAP10645 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHGAP10645 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.65□□□□□ -1.5
CHGAP10645 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CHGAP10645 RNY3P5-201ENST00000384127 102 ntBASIC5.65□□□□□ -1.5
CHGAP10645 RNU1-57P-201ENST00000384491 166 ntBASIC5.65□□□□□ -1.5
CHGAP10645 Y_RNA.521-201ENST00000384560 114 ntBASIC5.65□□□□□ -1.5
CHGAP10645 MIR34B-201ENST00000385076 84 ntBASIC5.65□□□□□ -1.5
CHGAP10645 RNU6-750P-201ENST00000390946 107 ntBASIC5.65□□□□□ -1.5
CHGAP10645 RNU2-52P-201ENST00000410680 190 ntBASIC5.65□□□□□ -1.5
CHGAP10645 AP001328.1-201ENST00000528550 176 ntBASIC5.65□□□□□ -1.5
CHGAP10645 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.65□□□□□ -1.5
CHGAP10645 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.65□□□□□ -1.5
CHGAP10645 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.65□□□□□ -1.5
CHGAP10645 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.65□□□□□ -1.5
CHGAP10645 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CHGAP10645 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.65□□□□□ -1.51
CHGAP10645 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.51
CHGAP10645 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CHGAP10645 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHGAP10645 AL513302.2-201ENST00000562313 1842 ntBASIC5.64□□□□□ -1.51
CHGAP10645 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHGAP10645 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.64□□□□□ -1.51
CHGAP10645 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHGAP10645 AC110774.1-201ENST00000623567 2018 ntBASIC5.64□□□□□ -1.51
CHGAP10645 RNU6-198P-201ENST00000384258 104 ntBASIC5.64□□□□□ -1.51
CHGAP10645 MIR586-201ENST00000385035 97 ntBASIC5.64□□□□□ -1.51
CHGAP10645 HSPE1P21-201ENST00000438283 308 ntBASIC5.64□□□□□ -1.51
CHGAP10645 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.64□□□□□ -1.51
CHGAP10645 AL133162.1-201ENST00000463228 453 ntBASIC5.64□□□□□ -1.51
CHGAP10645 RPL23AP62-201ENST00000463396 453 ntBASIC5.64□□□□□ -1.51
CHGAP10645 YWHAEP4-201ENST00000505390 198 ntBASIC5.64□□□□□ -1.51
CHGAP10645 RN7SKP179-201ENST00000516126 217 ntBASIC5.64□□□□□ -1.51
CHGAP10645 RNU6-561P-201ENST00000516222 102 ntBASIC5.64□□□□□ -1.51
CHGAP10645 SNORA70.24-201ENST00000517233 118 ntBASIC5.64□□□□□ -1.51
CHGAP10645 AC233702.9-201ENST00000581528 203 ntBASIC5.64□□□□□ -1.51
CHGAP10645 AL138880.2-201ENST00000616214 239 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms