Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 AC060773.1-201ENST00000421698 310 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 AC073614.1-201ENST00000438690 650 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.38□□□□□ -2.35
PTPRFP10586 AC010531.2-201ENST00000465012 153 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.38□□□□□ -2.35
PTPRFP10586 MTND3P5-201ENST00000512798 333 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.38□□□□□ -2.35
PTPRFP10586 AC087883.1-201ENST00000551882 391 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 AL121579.1-201ENST00000555129 305 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 AC021231.3-201ENST00000558497 370 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 AC010620.1-201ENST00000601088 1102 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 AC121334.2-201ENST00000605387 271 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
PTPRFP10586 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
PTPRFP10586 RNY4P24-201ENST00000362735 96 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 RAP1BP3-201ENST00000407180 549 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 AC244670.1-201ENST00000436879 112 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 AL590705.4-201ENST00000532209 134 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 MIR4709-201ENST00000577272 72 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 MIR6718-201ENST00000616153 80 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 AC136475.10-201ENST00000620253 385 ntBASIC0.38□□□□□ -2.35
PTPRFP10586 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.38□□□□□ -2.35
PTPRFP10586 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
PTPRFP10586 RNU6-1179P-201ENST00000384667 107 ntBASIC0.37□□□□□ -2.35
PTPRFP10586 RPS20P2-201ENST00000402520 389 ntBASIC0.37□□□□□ -2.35
PTPRFP10586 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.37□□□□□ -2.35
PTPRFP10586 MTND5P2-201ENST00000442927 1142 ntBASIC0.37□□□□□ -2.35
PTPRFP10586 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.37□□□□□ -2.35
PTPRFP10586 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.37□□□□□ -2.35
PTPRFP10586 SNORA31.2-201ENST00000516019 134 ntBASIC0.37□□□□□ -2.35
PTPRFP10586 RNU7-51P-201ENST00000516560 62 ntBASIC0.37□□□□□ -2.35
PTPRFP10586 SNORA70.22-201ENST00000517160 124 ntBASIC0.37□□□□□ -2.35
PTPRFP10586 AC115990.1-201ENST00000526957 301 ntBASIC0.37□□□□□ -2.35
PTPRFP10586 ZNF321P-202ENST00000550843 495 ntBASIC0.37□□□□□ -2.35
PTPRFP10586 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.37□□□□□ -2.35
PTPRFP10586 Z83818.1-201ENST00000603584 150 ntBASIC0.37□□□□□ -2.35
PTPRFP10586 AC104073.3-201ENST00000610942 955 ntBASIC0.37□□□□□ -2.35
PTPRFP10586 AP002782.1-201ENST00000623107 614 ntBASIC0.37□□□□□ -2.35
PTPRFP10586 AL391994.1-201ENST00000254724 282 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 RNU6-222P-201ENST00000362438 107 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 RNU6-371P-201ENST00000364283 108 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 SNORD31B-201ENST00000364977 69 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 RNA5SP299-201ENST00000391203 116 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 MIR942-201ENST00000401111 86 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.36□□□□□ -2.35
PTPRFP10586 AC006026.2-201ENST00000457376 180 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 SNORD124-201ENST00000459577 104 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 RPL39P38-201ENST00000467018 153 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 RNU6-201P-201ENST00000517100 61 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 AC008088.1-201ENST00000580993 280 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 AC012409.4-201ENST00000612923 249 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 SNORD3E-202ENST00000627253 216 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 AC092268.1-201ENST00000342691 405 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 Y_RNA.192-201ENST00000363977 102 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 RNU6-384P-201ENST00000364900 104 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 RNU6-378P-201ENST00000384324 107 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 MIR605-201ENST00000385078 83 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.36□□□□□ -2.35
PTPRFP10586 USP9YP11-201ENST00000427537 717 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.36□□□□□ -2.35
PTPRFP10586 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.36□□□□□ -2.35
PTPRFP10586 AC011406.1-201ENST00000512440 370 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 SNORD79.1-201ENST00000516069 84 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.36□□□□□ -2.35
PTPRFP10586 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.36□□□□□ -2.35
PTPRFP10586 AC090888.2-201ENST00000559765 1144 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 MIR3923-201ENST00000579521 83 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.36□□□□□ -2.35
PTPRFP10586 AL034555.1-201ENST00000604816 211 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 AC097478.2-201ENST00000610572 514 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 AC026585.1-201ENST00000619582 524 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 AC099786.3-201ENST00000565735 1410 ntBASIC0.36□□□□□ -2.35
PTPRFP10586 MIR340-201ENST00000362125 95 ntBASIC0.35□□□□□ -2.35
PTPRFP10586 RNU6-1065P-201ENST00000384513 106 ntBASIC0.35□□□□□ -2.35
PTPRFP10586 EEF1A1P40-201ENST00000412883 573 ntBASIC0.35□□□□□ -2.35
PTPRFP10586 HIGD1AP15-201ENST00000416198 280 ntBASIC0.35□□□□□ -2.35
PTPRFP10586 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.35□□□□□ -2.35
PTPRFP10586 AC116353.3-201ENST00000511215 249 ntBASIC0.35□□□□□ -2.35
PTPRFP10586 SNORD60.2-201ENST00000516883 86 ntBASIC0.35□□□□□ -2.35
PTPRFP10586 AC018659.1-201ENST00000551083 169 ntBASIC0.35□□□□□ -2.35
PTPRFP10586 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.35□□□□□ -2.35
PTPRFP10586 AC008752.3-201ENST00000588113 712 ntBASIC0.35□□□□□ -2.35
PTPRFP10586 AC012557.2-201ENST00000605919 418 ntBASIC0.35□□□□□ -2.35
PTPRFP10586 AC021506.2-201ENST00000612354 169 ntBASIC0.35□□□□□ -2.35
PTPRFP10586 AC063943.3-201ENST00000615562 356 ntBASIC0.35□□□□□ -2.35
PTPRFP10586 AL121895.2-201ENST00000619558 447 ntBASIC0.35□□□□□ -2.35
PTPRFP10586 snoU2-30.2-201ENST00000362805 70 ntBASIC0.34□□□□□ -2.35
PTPRFP10586 U3.4-201ENST00000363352 213 ntBASIC0.34□□□□□ -2.35
PTPRFP10586 Y_RNA.294-201ENST00000364916 102 ntBASIC0.34□□□□□ -2.35
PTPRFP10586 RNA5SP127-201ENST00000411051 133 ntBASIC0.34□□□□□ -2.35
PTPRFP10586 RPL23AP95-201ENST00000426806 265 ntBASIC0.34□□□□□ -2.35
PTPRFP10586 USP9YP14-201ENST00000430663 563 ntBASIC0.34□□□□□ -2.35
PTPRFP10586 SNRPEP8-201ENST00000442866 260 ntBASIC0.34□□□□□ -2.35
PTPRFP10586 GAPDHP17-201ENST00000449858 1001 ntBASIC0.34□□□□□ -2.35
PTPRFP10586 RPS26P48-201ENST00000491713 339 ntBASIC0.34□□□□□ -2.35
PTPRFP10586 AC022447.4-201ENST00000504053 364 ntBASIC0.34□□□□□ -2.35
PTPRFP10586 RNU4-57P-201ENST00000515980 135 ntBASIC0.34□□□□□ -2.35
PTPRFP10586 AC109810.1-201ENST00000534066 224 ntBASIC0.34□□□□□ -2.35
PTPRFP10586 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.34□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms