Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MTND2P4-201ENST00000445034 1004 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 AC013470.1-201ENST00000453438 462 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 MTCYBP1-201ENST00000454315 1119 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 SNRPGP7-201ENST00000469016 106 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.92□□□□□ -2.26
COL4A2P08572 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.92□□□□□ -2.26
COL4A2P08572 AC005178.1-201ENST00000508392 440 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.92□□□□□ -2.26
COL4A2P08572 Y_RNA.681-201ENST00000516445 113 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 RNU6-232P-201ENST00000517144 64 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.92□□□□□ -2.26
COL4A2P08572 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.92□□□□□ -2.26
COL4A2P08572 AC023050.3-201ENST00000541142 333 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 MIR3941-201ENST00000582572 103 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 MIR548AB-201ENST00000584917 84 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 AL512605.2-201ENST00000592972 256 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 AC091805.2-201ENST00000603848 235 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 AC093424.1-201ENST00000604999 338 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
COL4A2P08572 AC072046.2-201ENST00000618366 268 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 AL390237.1-201ENST00000404226 1415 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 RNU6-428P-201ENST00000362942 107 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 SNORA70.7-201ENST00000384159 133 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.92□□□□□ -2.26
COL4A2P08572 AC004941.2-201ENST00000427009 228 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 AC244670.1-201ENST00000436879 112 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 AC132479.1-201ENST00000449160 144 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 RNA5SP269-201ENST00000459032 137 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.92□□□□□ -2.26
COL4A2P08572 SCARNA24.1-201ENST00000516465 137 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 RN7SKP287-201ENST00000516546 266 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 RSL24D1P11-201ENST00000591045 491 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 AL078605.1-201ENST00000603529 500 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 AC009161.2-201ENST00000624626 138 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 ZNF680P1-201ENST00000436625 1469 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
COL4A2P08572 U3.4-201ENST00000363352 213 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 Y_RNA.433-201ENST00000384089 102 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 RNU6-74P-201ENST00000384235 107 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 Y_RNA.458-201ENST00000384240 102 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 RNU6-456P-201ENST00000384493 107 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 MT-TH-201ENST00000387441 69 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 SNORD70.1-201ENST00000391007 85 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 RNU6-550P-201ENST00000391057 101 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.91□□□□□ -2.26
COL4A2P08572 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A2P08572 AC000111.3-201ENST00000433478 193 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 AC112492.4-201ENST00000456549 352 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 RNU1-98P-201ENST00000458992 160 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 SCARNA18-201ENST00000459004 134 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 RAP1BP2-201ENST00000478270 544 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 FAM206BP-201ENST00000510179 541 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A2P08572 AC073539.2-201ENST00000597113 165 ntBASIC0.91□□□□□ -2.26
COL4A2P08572 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A2P08572 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COL4A2P08572 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
COL4A2P08572 RNU4-15P-201ENST00000362613 141 ntBASIC0.9□□□□□ -2.27
COL4A2P08572 RNU4-48P-201ENST00000365559 182 ntBASIC0.9□□□□□ -2.27
COL4A2P08572 SNORA12-201ENST00000391162 147 ntBASIC0.9□□□□□ -2.27
COL4A2P08572 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.9□□□□□ -2.27
COL4A2P08572 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.9□□□□□ -2.27
COL4A2P08572 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.9□□□□□ -2.27
COL4A2P08572 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.9□□□□□ -2.27
COL4A2P08572 RPL31P3-201ENST00000458430 332 ntBASIC0.9□□□□□ -2.27
COL4A2P08572 AC027575.1-201ENST00000481064 460 ntBASIC0.9□□□□□ -2.27
COL4A2P08572 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.9□□□□□ -2.27
COL4A2P08572 COPS8P3-201ENST00000526024 482 ntBASIC0.9□□□□□ -2.27
COL4A2P08572 AL356057.1-201ENST00000533798 831 ntBASIC0.9□□□□□ -2.27
COL4A2P08572 MTND1P24-201ENST00000552175 861 ntBASIC0.9□□□□□ -2.27
COL4A2P08572 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.9□□□□□ -2.27
COL4A2P08572 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.9□□□□□ -2.27
COL4A2P08572 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.9□□□□□ -2.27
COL4A2P08572 AC008752.3-201ENST00000588113 712 ntBASIC0.9□□□□□ -2.27
COL4A2P08572 MIR8074-201ENST00000615081 81 ntBASIC0.9□□□□□ -2.27
COL4A2P08572 MTND4P14-201ENST00000435799 1354 ntBASIC0.9□□□□□ -2.27
COL4A2P08572 CBX3P1-201ENST00000325243 554 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 Y_RNA.332-201ENST00000365271 113 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 RNU6-692P-201ENST00000384496 107 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 RNY3P10-201ENST00000384764 102 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 RPS29P13-201ENST00000402041 169 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 MTCO3P41-201ENST00000414801 328 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
COL4A2P08572 SDAD1P3-201ENST00000427380 333 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 AC010975.2-201ENST00000427781 588 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.89□□□□□ -2.27
COL4A2P08572 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.89□□□□□ -2.27
COL4A2P08572 AL035666.1-201ENST00000446195 348 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 AC022364.2-201ENST00000457963 554 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 GMFBP1-201ENST00000467831 427 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 RPS23P5-201ENST00000495419 428 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 AC008834.1-201ENST00000511612 175 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.89□□□□□ -2.27
COL4A2P08572 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.89□□□□□ -2.27
COL4A2P08572 AC091135.1-201ENST00000585943 307 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 AC103810.8-201ENST00000607347 118 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
COL4A2P08572 SNORD98-201ENST00000636377 67 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 LINC02555-201ENST00000563933 1951 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms