Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC083798.1-201ENST00000472671 131 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 FO393415.2-201ENST00000480085 343 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 AC008628.2-201ENST00000502605 298 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 AC021146.2-201ENST00000504736 556 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 RNU6-405P-201ENST00000516637 110 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 MTND2P38-201ENST00000522536 667 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 AC104576.1-201ENST00000524225 88 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DPB1P04440 MIR4255-201ENST00000579351 72 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 MIR3923-201ENST00000579521 83 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 AL356157.2-201ENST00000605122 111 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 AC103810.8-201ENST00000607347 118 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 AL121757.2-201ENST00000611223 313 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 AC103705.1-201ENST00000619013 241 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 MIR6863-201ENST00000636112 90 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DPB1P04440 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
HLA-DPB1P04440 LINC02555-201ENST00000563933 1951 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 MTND5P10-201ENST00000603719 1809 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 RNU1-17P-201ENST00000363022 152 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 Y_RNA.167-201ENST00000363735 109 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 U3.9-201ENST00000363823 204 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 SNORA69-201ENST00000383895 132 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 SNORD116-2-201ENST00000384274 95 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 RNU6-160P-201ENST00000384591 107 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 SNORD116-6-201ENST00000384711 96 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 SNORA48.1-201ENST00000390879 135 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 RNA5SP212-201ENST00000391223 107 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 AL356432.1-201ENST00000405809 419 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 RNA5SP100-201ENST00000410903 110 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 RNA5SP59-201ENST00000410922 110 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DPB1P04440 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DPB1P04440 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DPB1P04440 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DPB1P04440 RNU6-261P-201ENST00000459506 102 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 AC007547.1-201ENST00000462177 490 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 RPS29P27-201ENST00000463711 170 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 AC130509.1-201ENST00000464158 433 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.34□□□□□ -2.19
HLA-DPB1P04440 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.34□□□□□ -2.19
HLA-DPB1P04440 AC005741.1-201ENST00000511094 432 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 RNU6-1069P-201ENST00000516612 133 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 RNU6-1098P-201ENST00000516772 96 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 RNU6-835P-201ENST00000516974 104 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 AC087441.2-201ENST00000529141 262 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 AC025423.5-201ENST00000550230 219 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.34□□□□□ -2.19
HLA-DPB1P04440 CYP2C61P-201ENST00000604072 290 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 BX248123.2-201ENST00000606318 124 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 Z99129.1-201ENST00000612510 255 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 AC130454.1-201ENST00000622948 401 ntBASIC1.34□□□□□ -2.19
HLA-DPB1P04440 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DPB1P04440 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
HLA-DPB1P04440 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
HLA-DPB1P04440 RNU4-66P-201ENST00000365199 138 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 RNU6-780P-201ENST00000391030 104 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 RNA5SP213-201ENST00000391031 106 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 CALM2P3-201ENST00000400429 449 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 AC009310.1-201ENST00000414414 451 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DPB1P04440 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 snoU13.6-201ENST00000458785 104 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 TOMM22P6-201ENST00000465035 409 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.33□□□□□ -2.2
HLA-DPB1P04440 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DPB1P04440 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DPB1P04440 RNU6-612P-201ENST00000516909 102 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 RNU6-323P-201ENST00000521915 107 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 DEFB131C-201ENST00000528817 165 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.33□□□□□ -2.2
HLA-DPB1P04440 AP003034.1-201ENST00000534621 422 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 EIF4A1P12-201ENST00000551910 141 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.33□□□□□ -2.2
HLA-DPB1P04440 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DPB1P04440 CYP4A27P-201ENST00000567218 190 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.33□□□□□ -2.2
HLA-DPB1P04440 MIR4713-201ENST00000582691 75 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 MIR5692C1-201ENST00000585309 91 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 AC092807.2-201ENST00000609367 243 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 AL158209.2-201ENST00000619266 216 ntBASIC1.33□□□□□ -2.2
HLA-DPB1P04440 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.33□□□□□ -2.2
HLA-DPB1P04440 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.32□□□□□ -2.2
HLA-DPB1P04440 RNU1-62P-201ENST00000362599 164 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 RNU4-56P-201ENST00000364700 142 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 RNU6-259P-201ENST00000383999 107 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 SNORA32.2-201ENST00000384049 122 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 RNU6-439P-201ENST00000384188 106 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 MIR208B-201ENST00000401172 77 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 MIR1323-201ENST00000408090 73 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 RNU6-648P-201ENST00000410190 107 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 MTCO3P41-201ENST00000414801 328 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 AC123900.1-201ENST00000420390 96 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 AC139712.2-201ENST00000424302 339 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 TIMM9P3-201ENST00000428659 274 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms