Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.54□□□□□ -2
TOMM40O96008 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.54□□□□□ -2
TOMM40O96008 RRN3P3-201ENST00000549207 578 ntBASIC2.54□□□□□ -2
TOMM40O96008 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.54□□□□□ -2
TOMM40O96008 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.54□□□□□ -2
TOMM40O96008 SNORD113-5-201ENST00000607261 78 ntBASIC2.54□□□□□ -2
TOMM40O96008 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.54□□□□□ -2
TOMM40O96008 AL034408.1-202ENST00000636088 415 ntBASIC2.54□□□□□ -2
TOMM40O96008 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.54□□□□□ -2
TOMM40O96008 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.54□□□□□ -2
TOMM40O96008 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.54□□□□□ -2
TOMM40O96008 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TOMM40O96008 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.54□□□□□ -2
TOMM40O96008 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
TOMM40O96008 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.54□□□□□ -2
TOMM40O96008 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.54□□□□□ -2
TOMM40O96008 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.54□□□□□ -2
TOMM40O96008 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.53□□□□□ -2
TOMM40O96008 AC002543.1-201ENST00000299783 1954 ntBASIC2.53□□□□□ -2
TOMM40O96008 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
TOMM40O96008 Y_RNA.29-201ENST00000362570 113 ntBASIC2.53□□□□□ -2
TOMM40O96008 Y_RNA.200-201ENST00000364018 102 ntBASIC2.53□□□□□ -2
TOMM40O96008 RNY1-201ENST00000364228 113 ntBASIC2.53□□□□□ -2
TOMM40O96008 Y_RNA.286-201ENST00000364813 102 ntBASIC2.53□□□□□ -2
TOMM40O96008 RNU6-281P-201ENST00000384212 103 ntBASIC2.53□□□□□ -2
TOMM40O96008 MIR1193-201ENST00000408109 78 ntBASIC2.53□□□□□ -2
TOMM40O96008 MIR1298-201ENST00000408783 112 ntBASIC2.53□□□□□ -2
TOMM40O96008 RNA5SP390-201ENST00000410191 113 ntBASIC2.53□□□□□ -2
TOMM40O96008 RNU2-49P-201ENST00000410666 184 ntBASIC2.53□□□□□ -2
TOMM40O96008 RNA5SP229-201ENST00000410809 99 ntBASIC2.53□□□□□ -2
TOMM40O96008 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.53□□□□□ -2
TOMM40O96008 AC138623.1-201ENST00000418060 216 ntBASIC2.53□□□□□ -2
TOMM40O96008 AL358075.3-201ENST00000426289 226 ntBASIC2.53□□□□□ -2
TOMM40O96008 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.53□□□□□ -2
TOMM40O96008 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.53□□□□□ -2
TOMM40O96008 AP000705.1-201ENST00000454567 350 ntBASIC2.53□□□□□ -2
TOMM40O96008 AC117440.1-201ENST00000474107 571 ntBASIC2.53□□□□□ -2
TOMM40O96008 RPL26P26-201ENST00000480251 434 ntBASIC2.53□□□□□ -2
TOMM40O96008 SEPT14P8-201ENST00000508026 178 ntBASIC2.53□□□□□ -2
TOMM40O96008 SNORA40.9-201ENST00000515895 93 ntBASIC2.53□□□□□ -2
TOMM40O96008 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.53□□□□□ -2
TOMM40O96008 AC115990.1-201ENST00000526957 301 ntBASIC2.53□□□□□ -2
TOMM40O96008 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.53□□□□□ -2
TOMM40O96008 MIR4276-201ENST00000584832 70 ntBASIC2.53□□□□□ -2
TOMM40O96008 AL365434.2-201ENST00000607979 234 ntBASIC2.53□□□□□ -2
TOMM40O96008 AC127459.3-201ENST00000624328 466 ntBASIC2.53□□□□□ -2
TOMM40O96008 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.53□□□□□ -2
TOMM40O96008 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.53□□□□□ -2
TOMM40O96008 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
TOMM40O96008 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.52□□□□□ -2.01
TOMM40O96008 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TOMM40O96008 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TOMM40O96008 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
TOMM40O96008 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TOMM40O96008 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.52□□□□□ -2.01
TOMM40O96008 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
TOMM40O96008 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TOMM40O96008 SNORA25.1-201ENST00000362326 128 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 Y_RNA.44-201ENST00000362676 108 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 RNU6-1285P-201ENST00000363480 105 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 SNORD115-8-201ENST00000363856 82 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 SNORD115-38-201ENST00000365037 82 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 RNU6-1062P-201ENST00000383908 107 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 RNU6-514P-201ENST00000384208 107 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 Y_RNA.555-201ENST00000384673 110 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 RNU6-19P-201ENST00000384718 107 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 MIR329-1-201ENST00000385028 80 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 SNORD58.1-201ENST00000391313 66 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 RNU5A-5P-201ENST00000411054 116 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 RPS26P42-201ENST00000413485 326 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.52□□□□□ -2.01
TOMM40O96008 AC012306.1-201ENST00000423267 114 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.52□□□□□ -2.01
TOMM40O96008 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.52□□□□□ -2.01
TOMM40O96008 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.52□□□□□ -2.01
TOMM40O96008 AL133547.1-201ENST00000448546 220 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.52□□□□□ -2.01
TOMM40O96008 AC090525.1-201ENST00000479116 478 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.52□□□□□ -2.01
TOMM40O96008 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.52□□□□□ -2.01
TOMM40O96008 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.52□□□□□ -2.01
TOMM40O96008 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.52□□□□□ -2.01
TOMM40O96008 AL078605.1-201ENST00000603529 500 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.52□□□□□ -2.01
TOMM40O96008 IGHVIII-44-202ENST00000636235 289 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 SNORD98-201ENST00000636377 67 ntBASIC2.52□□□□□ -2.01
TOMM40O96008 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.52□□□□□ -2.01
TOMM40O96008 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.52□□□□□ -2.01
TOMM40O96008 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.52□□□□□ -2.01
TOMM40O96008 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TOMM40O96008 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TOMM40O96008 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
TOMM40O96008 Z83843.1-201ENST00000604070 3685 ntBASIC2.51□□□□□ -2.01
TOMM40O96008 RNA5SP119-201ENST00000362715 117 ntBASIC2.51□□□□□ -2.01
TOMM40O96008 RNU5F-3P-201ENST00000363767 117 ntBASIC2.51□□□□□ -2.01
TOMM40O96008 RNU6-961P-201ENST00000363893 105 ntBASIC2.51□□□□□ -2.01
TOMM40O96008 RNU4-56P-201ENST00000364700 142 ntBASIC2.51□□□□□ -2.01
TOMM40O96008 RNU1-64P-201ENST00000365443 163 ntBASIC2.51□□□□□ -2.01
TOMM40O96008 RNU6-20P-201ENST00000384106 107 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms