Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.63□□□□□ -2.15
MBD3O95983 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.63□□□□□ -2.15
MBD3O95983 RPS29P23-201ENST00000458635 123 ntBASIC1.63□□□□□ -2.15
MBD3O95983 RNU6-261P-201ENST00000459506 102 ntBASIC1.63□□□□□ -2.15
MBD3O95983 AC083798.1-201ENST00000472671 131 ntBASIC1.63□□□□□ -2.15
MBD3O95983 AC027575.1-201ENST00000481064 460 ntBASIC1.63□□□□□ -2.15
MBD3O95983 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.63□□□□□ -2.15
MBD3O95983 MIR449C-201ENST00000516047 92 ntBASIC1.63□□□□□ -2.15
MBD3O95983 RNVU1-2-201ENST00000516326 135 ntBASIC1.63□□□□□ -2.15
MBD3O95983 AC087854.1-201ENST00000519706 414 ntBASIC1.63□□□□□ -2.15
MBD3O95983 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.63□□□□□ -2.15
MBD3O95983 MTND3P12-201ENST00000559068 328 ntBASIC1.63□□□□□ -2.15
MBD3O95983 AC025754.2-201ENST00000606491 432 ntBASIC1.63□□□□□ -2.15
MBD3O95983 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.63□□□□□ -2.15
MBD3O95983 RNU6-661P-201ENST00000362409 107 ntBASIC1.62□□□□□ -2.15
MBD3O95983 SNORD116-9-201ENST00000384000 95 ntBASIC1.62□□□□□ -2.15
MBD3O95983 SNORD116-3-201ENST00000384287 95 ntBASIC1.62□□□□□ -2.15
MBD3O95983 SNORD116-7-201ENST00000384404 95 ntBASIC1.62□□□□□ -2.15
MBD3O95983 SNORD116-5-201ENST00000384462 95 ntBASIC1.62□□□□□ -2.15
MBD3O95983 Y_RNA.504-201ENST00000384481 104 ntBASIC1.62□□□□□ -2.15
MBD3O95983 MIR504-201ENST00000385065 83 ntBASIC1.62□□□□□ -2.15
MBD3O95983 MIR758-201ENST00000390227 88 ntBASIC1.62□□□□□ -2.15
MBD3O95983 NCOR1P3-201ENST00000420479 303 ntBASIC1.62□□□□□ -2.15
MBD3O95983 MTCO3P46-201ENST00000425787 232 ntBASIC1.62□□□□□ -2.15
MBD3O95983 AL354695.1-201ENST00000427935 228 ntBASIC1.62□□□□□ -2.15
MBD3O95983 MTND1P26-201ENST00000440488 538 ntBASIC1.62□□□□□ -2.15
MBD3O95983 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.62□□□□□ -2.15
MBD3O95983 RNU6-189P-201ENST00000516120 101 ntBASIC1.62□□□□□ -2.15
MBD3O95983 RNU6-1069P-201ENST00000516612 133 ntBASIC1.62□□□□□ -2.15
MBD3O95983 CENPUP1-201ENST00000526649 1202 ntBASIC1.62□□□□□ -2.15
MBD3O95983 AC104383.1-201ENST00000530297 370 ntBASIC1.62□□□□□ -2.15
MBD3O95983 VN1R80P-201ENST00000597126 338 ntBASIC1.62□□□□□ -2.15
MBD3O95983 AL590240.4-201ENST00000616908 390 ntBASIC1.62□□□□□ -2.15
MBD3O95983 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.62□□□□□ -2.15
MBD3O95983 AC090582.1-201ENST00000636321 199 ntBASIC1.62□□□□□ -2.15
MBD3O95983 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.61□□□□□ -2.15
MBD3O95983 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
MBD3O95983 MIR340-201ENST00000362125 95 ntBASIC1.61□□□□□ -2.15
MBD3O95983 U8.1-201ENST00000362843 134 ntBASIC1.61□□□□□ -2.15
MBD3O95983 RNU6-1322P-201ENST00000364309 107 ntBASIC1.61□□□□□ -2.15
MBD3O95983 SNORA32.2-201ENST00000384049 122 ntBASIC1.61□□□□□ -2.15
MBD3O95983 RNU6-378P-201ENST00000384324 107 ntBASIC1.61□□□□□ -2.15
MBD3O95983 MIR30A-201ENST00000385092 71 ntBASIC1.61□□□□□ -2.15
MBD3O95983 U8.13-201ENST00000390842 128 ntBASIC1.61□□□□□ -2.15
MBD3O95983 RNA5SP219-201ENST00000390940 113 ntBASIC1.61□□□□□ -2.15
MBD3O95983 RNU4-55P-201ENST00000410731 137 ntBASIC1.61□□□□□ -2.15
MBD3O95983 RNU2-41P-201ENST00000410991 178 ntBASIC1.61□□□□□ -2.15
MBD3O95983 MTCO1P21-201ENST00000416634 589 ntBASIC1.61□□□□□ -2.15
MBD3O95983 ARL5AP1-201ENST00000418991 388 ntBASIC1.61□□□□□ -2.15
MBD3O95983 TPTE2P5-203ENST00000458118 728 ntBASIC1.61□□□□□ -2.15
MBD3O95983 AC016925.1-201ENST00000458303 298 ntBASIC1.61□□□□□ -2.15
MBD3O95983 snoU13.26-201ENST00000459452 105 ntBASIC1.61□□□□□ -2.15
MBD3O95983 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.61□□□□□ -2.15
MBD3O95983 AC091874.1-201ENST00000511402 339 ntBASIC1.61□□□□□ -2.15
MBD3O95983 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.61□□□□□ -2.15
MBD3O95983 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.61□□□□□ -2.15
MBD3O95983 AC006362.1-201ENST00000567392 174 ntBASIC1.61□□□□□ -2.15
MBD3O95983 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.61□□□□□ -2.15
MBD3O95983 AC025811.1-201ENST00000604312 472 ntBASIC1.61□□□□□ -2.15
MBD3O95983 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.61□□□□□ -2.15
MBD3O95983 AC073534.2-201ENST00000620377 381 ntBASIC1.61□□□□□ -2.15
MBD3O95983 AL359757.2-201ENST00000624309 274 ntBASIC1.61□□□□□ -2.15
MBD3O95983 AC245060.5-201ENST00000610778 3293 ntBASIC1.61□□□□□ -2.15
MBD3O95983 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
MBD3O95983 RNU6-227P-201ENST00000362865 103 ntBASIC1.6□□□□□ -2.15
MBD3O95983 RNU6-438P-201ENST00000365561 103 ntBASIC1.6□□□□□ -2.15
MBD3O95983 RNU6-1119P-201ENST00000384349 108 ntBASIC1.6□□□□□ -2.15
MBD3O95983 DEFB108C-201ENST00000400154 252 ntBASIC1.6□□□□□ -2.15
MBD3O95983 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.6□□□□□ -2.15
MBD3O95983 AC007395.1-201ENST00000451333 677 ntBASIC1.6□□□□□ -2.15
MBD3O95983 TOMM22P6-201ENST00000465035 409 ntBASIC1.6□□□□□ -2.15
MBD3O95983 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.6□□□□□ -2.15
MBD3O95983 AC114801.2-201ENST00000503825 781 ntBASIC1.6□□□□□ -2.15
MBD3O95983 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.6□□□□□ -2.15
MBD3O95983 ATP5EP1-201ENST00000510257 156 ntBASIC1.6□□□□□ -2.15
MBD3O95983 RNU1-41P-201ENST00000516161 162 ntBASIC1.6□□□□□ -2.15
MBD3O95983 RNU1-48P-201ENST00000516400 162 ntBASIC1.6□□□□□ -2.15
MBD3O95983 SNORA31.24-201ENST00000517232 57 ntBASIC1.6□□□□□ -2.15
MBD3O95983 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.6□□□□□ -2.15
MBD3O95983 AC016925.2-201ENST00000605108 242 ntBASIC1.6□□□□□ -2.15
MBD3O95983 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.6□□□□□ -2.15
MBD3O95983 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.6□□□□□ -2.15
MBD3O95983 MIR6845-201ENST00000613182 61 ntBASIC1.6□□□□□ -2.15
MBD3O95983 AC022513.1-201ENST00000624512 117 ntBASIC1.6□□□□□ -2.15
MBD3O95983 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.59□□□□□ -2.15
MBD3O95983 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
MBD3O95983 SNORD114-1-201ENST00000362705 72 ntBASIC1.59□□□□□ -2.15
MBD3O95983 RNU6-38P-201ENST00000384085 107 ntBASIC1.59□□□□□ -2.15
MBD3O95983 RNU6-1042P-201ENST00000384204 107 ntBASIC1.59□□□□□ -2.15
MBD3O95983 RPS26P42-201ENST00000413485 326 ntBASIC1.59□□□□□ -2.15
MBD3O95983 MTATP6P17-201ENST00000431030 672 ntBASIC1.59□□□□□ -2.15
MBD3O95983 SNRPGP13-201ENST00000442212 177 ntBASIC1.59□□□□□ -2.15
MBD3O95983 HMGN2P23-201ENST00000456759 269 ntBASIC1.59□□□□□ -2.15
MBD3O95983 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
MBD3O95983 RPS29P27-201ENST00000463711 170 ntBASIC1.59□□□□□ -2.15
MBD3O95983 RPS23P5-201ENST00000495419 428 ntBASIC1.59□□□□□ -2.15
MBD3O95983 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.59□□□□□ -2.15
MBD3O95983 SNORA25.15-201ENST00000516487 89 ntBASIC1.59□□□□□ -2.15
MBD3O95983 RNU6-1098P-201ENST00000516772 96 ntBASIC1.59□□□□□ -2.15
MBD3O95983 RNU6-612P-201ENST00000516909 102 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms