Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL590240.4-201ENST00000616908 390 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.32□□□□□ -1.88
CNOT4O95628 AC021753.1-201ENST00000635724 168 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.32□□□□□ -1.88
CNOT4O95628 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNOT4O95628 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
CNOT4O95628 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CNOT4O95628 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CNOT4O95628 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.31□□□□□ -1.88
CNOT4O95628 AC135776.4-201ENST00000624300 1904 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 Y_RNA.136-201ENST00000363444 102 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 SNORD115-8-201ENST00000363856 82 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 SNORD115-38-201ENST00000365037 82 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 RNA5SP240-201ENST00000365355 128 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 MIR544A-201ENST00000384855 91 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 MIR183-201ENST00000384958 110 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CNOT4O95628 U3.19-201ENST00000390893 196 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 FTH1P15-201ENST00000406984 280 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 AC096649.2-201ENST00000416186 393 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 AL035423.1-201ENST00000420331 213 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 POLR2KP2-201ENST00000438155 177 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 AC007395.1-201ENST00000451333 677 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 RPS4XP22-201ENST00000480755 780 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 AP001025.1-201ENST00000486139 332 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.31□□□□□ -1.88
CNOT4O95628 SNORA40.9-201ENST00000515895 93 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 SNORA27.4-201ENST00000516650 95 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 SNORA31.26-201ENST00000517250 137 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.31□□□□□ -1.88
CNOT4O95628 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.31□□□□□ -1.88
CNOT4O95628 RNU1-30P-201ENST00000606575 163 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.31□□□□□ -1.88
CNOT4O95628 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.31□□□□□ -1.88
CNOT4O95628 U6.106-201ENST00000636360 105 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 GABRG2-229ENST00000641017 3628 ntBASIC3.31□□□□□ -1.88
CNOT4O95628 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CNOT4O95628 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CNOT4O95628 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CNOT4O95628 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CNOT4O95628 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CNOT4O95628 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CNOT4O95628 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CNOT4O95628 AC138915.1-201ENST00000565427 1685 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CNOT4O95628 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CNOT4O95628 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
CNOT4O95628 AC004944.1-201ENST00000517807 3059 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.3□□□□□ -1.88
CNOT4O95628 Y_RNA.291-201ENST00000364886 113 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 Y_RNA.331-201ENST00000365267 102 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 SNORD113-1-201ENST00000365321 69 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 RNU6-1289P-201ENST00000384431 106 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 RN7SKP61-201ENST00000410642 295 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.3□□□□□ -1.88
CNOT4O95628 Z96811.1-201ENST00000445880 108 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 HMGN2P10-201ENST00000448085 265 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 SNORD105B-201ENST00000458770 79 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.3□□□□□ -1.88
CNOT4O95628 RPL31P41-201ENST00000477967 372 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 MRPS36P2-201ENST00000512569 299 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.3□□□□□ -1.88
CNOT4O95628 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.3□□□□□ -1.88
CNOT4O95628 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.3□□□□□ -1.88
CNOT4O95628 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.3□□□□□ -1.88
CNOT4O95628 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.3□□□□□ -1.88
CNOT4O95628 KLKP1-201ENST00000595979 403 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 AC005176.2-201ENST00000596933 147 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.3□□□□□ -1.88
CNOT4O95628 AC006001.4-201ENST00000622243 395 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 U6.105-201ENST00000637379 88 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CNOT4O95628 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.3□□□□□ -1.88
CNOT4O95628 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.3□□□□□ -1.88
CNOT4O95628 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.3□□□□□ -1.88
CNOT4O95628 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CNOT4O95628 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CNOT4O95628 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CNOT4O95628 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
CNOT4O95628 Y_RNA.233-201ENST00000364407 101 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 RNY1P5-201ENST00000383890 115 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 SNORA36A-201ENST00000384221 132 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 RNU6-750P-201ENST00000390946 107 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 HMGN2P8-201ENST00000391458 268 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 RN7SKP51-201ENST00000410781 304 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 RPL23AP36-201ENST00000413895 458 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.29□□□□□ -1.88
CNOT4O95628 AC104332.2-201ENST00000429959 156 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 MRPS10P1-201ENST00000448483 130 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 RPL23AP3-201ENST00000453844 468 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 SNORD2.1-201ENST00000458762 69 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 AC091021.1-201ENST00000468051 388 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 RN7SL293P-201ENST00000481765 281 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.29□□□□□ -1.88
CNOT4O95628 AC104619.4-201ENST00000510773 249 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 RAC1P2-201ENST00000511164 579 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 SNORA31.23-201ENST00000517219 133 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 AC022695.1-201ENST00000522089 237 ntBASIC3.29□□□□□ -1.88
CNOT4O95628 RPL21P9-201ENST00000556149 474 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms