Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
VAPBO95292 AL354692.1-201ENST00000423044 315 ntBASIC0.95□□□□□ -2.26
VAPBO95292 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.95□□□□□ -2.26
VAPBO95292 AC073614.1-201ENST00000438690 650 ntBASIC0.95□□□□□ -2.26
VAPBO95292 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.95□□□□□ -2.26
VAPBO95292 AC004854.1-201ENST00000440356 349 ntBASIC0.95□□□□□ -2.26
VAPBO95292 AC092473.1-201ENST00000441098 221 ntBASIC0.95□□□□□ -2.26
VAPBO95292 AC073910.1-201ENST00000445047 438 ntBASIC0.95□□□□□ -2.26
VAPBO95292 MTND1P18-201ENST00000448191 573 ntBASIC0.95□□□□□ -2.26
VAPBO95292 EPS15P1-201ENST00000448836 336 ntBASIC0.95□□□□□ -2.26
VAPBO95292 AC013470.1-201ENST00000453438 462 ntBASIC0.95□□□□□ -2.26
VAPBO95292 RNU7-34P-201ENST00000459394 64 ntBASIC0.95□□□□□ -2.26
VAPBO95292 AC114982.1-201ENST00000469402 321 ntBASIC0.95□□□□□ -2.26
VAPBO95292 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.95□□□□□ -2.26
VAPBO95292 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.95□□□□□ -2.26
VAPBO95292 RNU6-856P-201ENST00000516959 98 ntBASIC0.95□□□□□ -2.26
VAPBO95292 RNA5SP503-201ENST00000517047 117 ntBASIC0.95□□□□□ -2.26
VAPBO95292 AP003461.1-201ENST00000528866 78 ntBASIC0.95□□□□□ -2.26
VAPBO95292 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.95□□□□□ -2.26
VAPBO95292 AL391646.1-201ENST00000603860 190 ntBASIC0.95□□□□□ -2.26
VAPBO95292 AP000240.1-201ENST00000609910 452 ntBASIC0.95□□□□□ -2.26
VAPBO95292 MIR7844-201ENST00000616161 122 ntBASIC0.95□□□□□ -2.26
VAPBO95292 AC012676.2-201ENST00000619258 186 ntBASIC0.95□□□□□ -2.26
VAPBO95292 AL136221.1-201ENST00000621449 509 ntBASIC0.95□□□□□ -2.26
VAPBO95292 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
VAPBO95292 RNU6-169P-201ENST00000365336 107 ntBASIC0.94□□□□□ -2.26
VAPBO95292 Y_RNA.367-201ENST00000365544 101 ntBASIC0.94□□□□□ -2.26
VAPBO95292 RPS29P13-201ENST00000402041 169 ntBASIC0.94□□□□□ -2.26
VAPBO95292 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.94□□□□□ -2.26
VAPBO95292 RPL23AP95-201ENST00000426806 265 ntBASIC0.94□□□□□ -2.26
VAPBO95292 SNAP23P1-201ENST00000433229 246 ntBASIC0.94□□□□□ -2.26
VAPBO95292 AC104850.1-201ENST00000435940 476 ntBASIC0.94□□□□□ -2.26
VAPBO95292 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.94□□□□□ -2.26
VAPBO95292 AC007547.1-201ENST00000462177 490 ntBASIC0.94□□□□□ -2.26
VAPBO95292 AC011406.1-201ENST00000512440 370 ntBASIC0.94□□□□□ -2.26
VAPBO95292 MTATP6P9-201ENST00000515039 680 ntBASIC0.94□□□□□ -2.26
VAPBO95292 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.94□□□□□ -2.26
VAPBO95292 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.94□□□□□ -2.26
VAPBO95292 HSPE1P19-201ENST00000603327 295 ntBASIC0.94□□□□□ -2.26
VAPBO95292 AL359821.1-201ENST00000605519 182 ntBASIC0.94□□□□□ -2.26
VAPBO95292 BX284668.6-201ENST00000606899 438 ntBASIC0.94□□□□□ -2.26
VAPBO95292 AC064807.4-201ENST00000607201 407 ntBASIC0.94□□□□□ -2.26
VAPBO95292 AC126177.8-201ENST00000618339 1015 ntBASIC0.94□□□□□ -2.26
VAPBO95292 AC011155.2-201ENST00000623202 216 ntBASIC0.94□□□□□ -2.26
VAPBO95292 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.93□□□□□ -2.26
VAPBO95292 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
VAPBO95292 RNU6-392P-201ENST00000364926 101 ntBASIC0.93□□□□□ -2.26
VAPBO95292 SNORA25-201ENST00000384384 134 ntBASIC0.93□□□□□ -2.26
VAPBO95292 MIR222-201ENST00000384992 110 ntBASIC0.93□□□□□ -2.26
VAPBO95292 MIR300-201ENST00000401138 83 ntBASIC0.93□□□□□ -2.26
VAPBO95292 AL117342.1-201ENST00000404861 406 ntBASIC0.93□□□□□ -2.26
VAPBO95292 Y_RNA.598-201ENST00000410480 95 ntBASIC0.93□□□□□ -2.26
VAPBO95292 RNU4-46P-201ENST00000410818 138 ntBASIC0.93□□□□□ -2.26
VAPBO95292 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.93□□□□□ -2.26
VAPBO95292 AL603825.1-201ENST00000438481 80 ntBASIC0.93□□□□□ -2.26
VAPBO95292 AC244505.5-201ENST00000443639 207 ntBASIC0.93□□□□□ -2.26
VAPBO95292 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.93□□□□□ -2.26
VAPBO95292 RAP1BP2-201ENST00000478270 544 ntBASIC0.93□□□□□ -2.26
VAPBO95292 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.93□□□□□ -2.26
VAPBO95292 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.93□□□□□ -2.26
VAPBO95292 UBL5P1-201ENST00000507979 193 ntBASIC0.93□□□□□ -2.26
VAPBO95292 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.93□□□□□ -2.26
VAPBO95292 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.93□□□□□ -2.26
VAPBO95292 RNU2-34P-201ENST00000516534 121 ntBASIC0.93□□□□□ -2.26
VAPBO95292 CENPUP1-201ENST00000526649 1202 ntBASIC0.93□□□□□ -2.26
VAPBO95292 AC136932.1-201ENST00000574771 208 ntBASIC0.93□□□□□ -2.26
VAPBO95292 AL353149.1-201ENST00000610667 244 ntBASIC0.93□□□□□ -2.26
VAPBO95292 RNU6-925P-201ENST00000384629 104 ntBASIC0.92□□□□□ -2.26
VAPBO95292 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
VAPBO95292 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.92□□□□□ -2.26
VAPBO95292 AL117339.3-201ENST00000418733 162 ntBASIC0.92□□□□□ -2.26
VAPBO95292 GTF2IP13-201ENST00000438487 386 ntBASIC0.92□□□□□ -2.26
VAPBO95292 UBE2D3P4-201ENST00000441973 436 ntBASIC0.92□□□□□ -2.26
VAPBO95292 ZNF114P1-201ENST00000453500 292 ntBASIC0.92□□□□□ -2.26
VAPBO95292 RNU7-182P-201ENST00000459009 62 ntBASIC0.92□□□□□ -2.26
VAPBO95292 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
VAPBO95292 LRRC34P2-201ENST00000514850 553 ntBASIC0.92□□□□□ -2.26
VAPBO95292 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.92□□□□□ -2.26
VAPBO95292 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.92□□□□□ -2.26
VAPBO95292 MIR4498-201ENST00000577599 66 ntBASIC0.92□□□□□ -2.26
VAPBO95292 MIR3682-201ENST00000581338 84 ntBASIC0.92□□□□□ -2.26
VAPBO95292 MIR4753-201ENST00000585119 83 ntBASIC0.92□□□□□ -2.26
VAPBO95292 NIFKP6-201ENST00000598115 845 ntBASIC0.92□□□□□ -2.26
VAPBO95292 AL022345.2-201ENST00000606307 135 ntBASIC0.92□□□□□ -2.26
VAPBO95292 AC091304.9-201ENST00000612091 226 ntBASIC0.92□□□□□ -2.26
VAPBO95292 AC022418.1-201ENST00000624118 445 ntBASIC0.92□□□□□ -2.26
VAPBO95292 AL359697.1-201ENST00000624879 587 ntBASIC0.92□□□□□ -2.26
VAPBO95292 SEPT14P19-203ENST00000633205 211 ntBASIC0.92□□□□□ -2.26
VAPBO95292 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.92□□□□□ -2.26
VAPBO95292 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.91□□□□□ -2.26
VAPBO95292 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
VAPBO95292 RNU6-827P-201ENST00000365553 106 ntBASIC0.91□□□□□ -2.26
VAPBO95292 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
VAPBO95292 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.91□□□□□ -2.26
VAPBO95292 AC060773.1-201ENST00000421698 310 ntBASIC0.91□□□□□ -2.26
VAPBO95292 USP9YP14-201ENST00000430663 563 ntBASIC0.91□□□□□ -2.26
VAPBO95292 GPR143P-201ENST00000434155 205 ntBASIC0.91□□□□□ -2.26
VAPBO95292 AL596276.1-201ENST00000434465 418 ntBASIC0.91□□□□□ -2.26
VAPBO95292 PRPS1P1-201ENST00000445305 876 ntBASIC0.91□□□□□ -2.26
VAPBO95292 RPS27P1-201ENST00000450552 247 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms