Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC067942.3-201ENST00000512025 362 ntBASIC0.42□□□□□ -2.34
SNRNP200O75643 RNA5SP255-201ENST00000516370 107 ntBASIC0.42□□□□□ -2.34
SNRNP200O75643 AP002453.2-201ENST00000533503 320 ntBASIC0.42□□□□□ -2.34
SNRNP200O75643 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.42□□□□□ -2.34
SNRNP200O75643 MIR3118-1-201ENST00000581787 76 ntBASIC0.42□□□□□ -2.34
SNRNP200O75643 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.42□□□□□ -2.34
SNRNP200O75643 AC040896.1-201ENST00000613819 479 ntBASIC0.42□□□□□ -2.34
SNRNP200O75643 SNORD3E-202ENST00000627253 216 ntBASIC0.42□□□□□ -2.34
SNRNP200O75643 AC099654.13-201ENST00000639774 207 ntBASIC0.42□□□□□ -2.34
SNRNP200O75643 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
SNRNP200O75643 AC010615.1-201ENST00000594254 1764 ntBASIC0.42□□□□□ -2.34
SNRNP200O75643 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
SNRNP200O75643 RNU6-384P-201ENST00000364900 104 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 SNORA4.2-201ENST00000365313 147 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 ERHP2-201ENST00000402323 299 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 SNORD99-201ENST00000408612 74 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 AL596276.1-201ENST00000434465 418 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 MTCO2P7-201ENST00000446518 666 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 RNU6-201P-201ENST00000517100 61 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 AC090572.1-201ENST00000519251 160 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.41□□□□□ -2.34
SNRNP200O75643 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.41□□□□□ -2.34
SNRNP200O75643 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 AC024940.5-201ENST00000622889 474 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 MIR605-201ENST00000385078 83 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 MIR1284-201ENST00000408337 120 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 MIR1185-1-201ENST00000408598 86 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 AL354692.1-201ENST00000423044 315 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.41□□□□□ -2.34
SNRNP200O75643 AL049829.1-201ENST00000465411 156 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 AC048334.1-201ENST00000477975 159 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 AP000797.1-201ENST00000478870 387 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 COX6CP6-201ENST00000490840 228 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 TRBVA-201ENST00000498804 316 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.41□□□□□ -2.34
SNRNP200O75643 AC112206.4-201ENST00000515142 405 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 RNU6-1146P-201ENST00000516282 102 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 SNORA25.17-201ENST00000517184 124 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 AC022868.1-201ENST00000517767 391 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 SUMO2P18-201ENST00000518873 252 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 AC090142.3-201ENST00000519012 385 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 PCMTD1P2-201ENST00000565017 355 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 AC011712.1-201ENST00000588959 234 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 AC146944.4-201ENST00000602697 718 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 AL034555.1-201ENST00000604816 211 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 AC104458.1-201ENST00000608243 463 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 GHRLOS.1-201ENST00000610995 70 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.41□□□□□ -2.34
SNRNP200O75643 MIR8054-201ENST00000620877 86 ntBASIC0.41□□□□□ -2.34
SNRNP200O75643 SNORD32B-201ENST00000364460 84 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 RNU6-224P-201ENST00000384055 107 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 RNU6-769P-201ENST00000384407 104 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
SNRNP200O75643 MRPL35P1-201ENST00000404272 572 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 MIR1197-201ENST00000408818 88 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 RNU6-387P-201ENST00000411331 105 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 ELOCP4-201ENST00000420090 333 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 AL591043.1-201ENST00000432461 424 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 AL606517.2-201ENST00000442855 241 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.4□□□□□ -2.35
SNRNP200O75643 MTND1P12-201ENST00000455231 147 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 AC092989.1-201ENST00000481235 277 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.4□□□□□ -2.35
SNRNP200O75643 RNU6-276P-201ENST00000516114 96 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 RNU6-1003P-201ENST00000517099 105 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.4□□□□□ -2.35
SNRNP200O75643 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.4□□□□□ -2.35
SNRNP200O75643 AC091489.2-201ENST00000566263 604 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 AC112187.2-201ENST00000604345 283 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 BCRP9-201ENST00000605312 388 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.4□□□□□ -2.35
SNRNP200O75643 RNU6-413P-201ENST00000384115 107 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 MIR216A-201ENST00000385063 110 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 MIR548B-201ENST00000385247 97 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.4□□□□□ -2.35
SNRNP200O75643 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.4□□□□□ -2.35
SNRNP200O75643 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.4□□□□□ -2.35
SNRNP200O75643 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.4□□□□□ -2.35
SNRNP200O75643 AL139824.2-201ENST00000458731 1095 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 AC145146.1-201ENST00000496370 254 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.4□□□□□ -2.35
SNRNP200O75643 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.4□□□□□ -2.35
SNRNP200O75643 SUMO2P16-201ENST00000519475 264 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.4□□□□□ -2.35
SNRNP200O75643 AP003181.2-201ENST00000528941 181 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
SNRNP200O75643 CYP4A27P-201ENST00000567218 190 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 MIR5692A1-201ENST00000580523 69 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 AC008752.3-201ENST00000588113 712 ntBASIC0.4□□□□□ -2.35
SNRNP200O75643 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
SNRNP200O75643 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.4□□□□□ -2.35
SNRNP200O75643 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.4□□□□□ -2.35
SNRNP200O75643 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
SNRNP200O75643 Y_RNA.18-201ENST00000362461 102 ntBASIC0.39□□□□□ -2.35
SNRNP200O75643 RNU6-716P-201ENST00000365621 103 ntBASIC0.39□□□□□ -2.35
SNRNP200O75643 Y_RNA.480-201ENST00000384364 102 ntBASIC0.39□□□□□ -2.35
SNRNP200O75643 RNU6-83P-201ENST00000384568 112 ntBASIC0.39□□□□□ -2.35
SNRNP200O75643 MIR200A-201ENST00000384875 90 ntBASIC0.39□□□□□ -2.35
SNRNP200O75643 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
SNRNP200O75643 RNU2-70P-201ENST00000410718 179 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms