Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF40AO75400 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.96□□□□□ -1.78
PRPF40AO75400 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF40AO75400 MIR148B-201ENST00000362252 99 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 SNORA71.3-201ENST00000362582 128 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 U3.9-201ENST00000363823 204 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 Y_RNA.230-201ENST00000364348 109 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 SNORA72.2-201ENST00000365028 127 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 MIR449B-201ENST00000384995 97 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 AL603910.2-201ENST00000407268 136 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 RNA5SP201-201ENST00000410316 124 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 AC126124.2-201ENST00000413542 321 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 AC097463.2-201ENST00000421074 142 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 RNU6-625P-201ENST00000459412 107 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 RPL23AP67-201ENST00000465341 474 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 RPL23AP70-201ENST00000483361 460 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.96□□□□□ -1.78
PRPF40AO75400 AC026241.1-201ENST00000517873 2142 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 AC026403.1-201ENST00000518938 295 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 RRN3P3-201ENST00000549207 578 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 EIF4A1P12-201ENST00000551910 141 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 AC026470.2-201ENST00000561492 181 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 MIR4423-201ENST00000580922 80 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 MIR4765-201ENST00000585007 77 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.96□□□□□ -1.78
PRPF40AO75400 AC010900.2-201ENST00000604508 210 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 AL357075.2-201ENST00000614906 189 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 UCA1.1-201ENST00000620952 75 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 AC110079.1-202ENST00000635213 138 ntBASIC3.96□□□□□ -1.78
PRPF40AO75400 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.95□□□□□ -1.78
PRPF40AO75400 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF40AO75400 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF40AO75400 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF40AO75400 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.95□□□□□ -1.78
PRPF40AO75400 RNU4-15P-201ENST00000362613 141 ntBASIC3.95□□□□□ -1.78
PRPF40AO75400 RNU6-1266P-201ENST00000362794 105 ntBASIC3.95□□□□□ -1.78
PRPF40AO75400 RNA5SP139-201ENST00000364340 117 ntBASIC3.95□□□□□ -1.78
PRPF40AO75400 SNORA18.3-201ENST00000384122 132 ntBASIC3.95□□□□□ -1.78
PRPF40AO75400 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PRPF40AO75400 ATP5A1P2-201ENST00000412323 255 ntBASIC3.95□□□□□ -1.78
PRPF40AO75400 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.95□□□□□ -1.78
PRPF40AO75400 SNORD105B-201ENST00000458770 79 ntBASIC3.95□□□□□ -1.78
PRPF40AO75400 RPS27P29-201ENST00000463110 252 ntBASIC3.95□□□□□ -1.78
PRPF40AO75400 AC091179.3-201ENST00000474761 144 ntBASIC3.95□□□□□ -1.78
PRPF40AO75400 AC104619.4-201ENST00000510773 249 ntBASIC3.95□□□□□ -1.78
PRPF40AO75400 SERF1AP1-201ENST00000514575 187 ntBASIC3.95□□□□□ -1.78
PRPF40AO75400 AC074133.1-201ENST00000515696 183 ntBASIC3.95□□□□□ -1.78
PRPF40AO75400 AC068657.1-201ENST00000520807 306 ntBASIC3.95□□□□□ -1.78
PRPF40AO75400 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF40AO75400 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF40AO75400 AC092628.2-201ENST00000622492 339 ntBASIC3.95□□□□□ -1.78
PRPF40AO75400 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.95□□□□□ -1.78
PRPF40AO75400 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PRPF40AO75400 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.94□□□□□ -1.78
PRPF40AO75400 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF40AO75400 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF40AO75400 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF40AO75400 snoU2_19.1-201ENST00000362361 80 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 SNORD9-201ENST00000362566 104 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 RNU1-62P-201ENST00000362599 164 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 RNA5SP383-201ENST00000362934 120 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 RNU6-727P-201ENST00000363592 107 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 RNA5SP51-201ENST00000364750 119 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 RNU6-1175P-201ENST00000365200 107 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 RNU6-1083P-201ENST00000384022 107 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 Y_RNA.498-201ENST00000384460 102 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 RNU6-1026P-201ENST00000384465 108 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 Y_RNA.570-201ENST00000384750 101 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.94□□□□□ -1.78
PRPF40AO75400 IFNA11P-201ENST00000446352 526 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 AL139109.1-201ENST00000455491 297 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF40AO75400 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.94□□□□□ -1.78
PRPF40AO75400 RN7SKP18-201ENST00000516005 275 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 AC233702.2-202ENST00000562547 291 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF40AO75400 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.94□□□□□ -1.78
PRPF40AO75400 BX284668.6-201ENST00000606899 438 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 AC006001.4-201ENST00000622243 395 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 AC018692.3-201ENST00000623929 123 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF40AO75400 AC009093.8-201ENST00000641769 292 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 AC069528.2-201ENST00000624849 1991 ntBASIC3.94□□□□□ -1.78
PRPF40AO75400 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PRPF40AO75400 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF40AO75400 AC027124.2-201ENST00000428249 105 ntBASIC3.93□□□□□ -1.78
PRPF40AO75400 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF40AO75400 MRPS36P2-201ENST00000512569 299 ntBASIC3.93□□□□□ -1.78
PRPF40AO75400 RNA5SP112-201ENST00000515937 99 ntBASIC3.93□□□□□ -1.78
PRPF40AO75400 AC018448.1-201ENST00000552843 316 ntBASIC3.93□□□□□ -1.78
PRPF40AO75400 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF40AO75400 U2.14-201ENST00000615943 113 ntBASIC3.93□□□□□ -1.78
PRPF40AO75400 AC005562.2-201ENST00000618264 111 ntBASIC3.93□□□□□ -1.78
PRPF40AO75400 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.93□□□□□ -1.78
PRPF40AO75400 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF40AO75400 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF40AO75400 MFSD8-233ENST00000641482 4860 ntBASIC3.92□□□□□ -1.78
PRPF40AO75400 Y_RNA.65-201ENST00000362846 100 ntBASIC3.92□□□□□ -1.78
PRPF40AO75400 Y_RNA.277-201ENST00000364754 102 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms