Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 Y_RNA.230-201ENST00000364348 109 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 RNU6-1325P-201ENST00000364905 105 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 Y_RNA.331-201ENST00000365267 102 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTCD1O75127 RNU6-449P-201ENST00000383914 107 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 MIR549A-201ENST00000385268 96 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 AL133475.1-201ENST00000404414 305 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 RNA5SP104-201ENST00000410989 118 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 AL160275.2-201ENST00000412010 394 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 AC004552.1-201ENST00000419089 348 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 UQCRBP2-201ENST00000447827 297 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 RPS26P3-201ENST00000470205 348 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 AC090543.2-201ENST00000483963 348 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 AC004057.1-201ENST00000485827 348 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.42□□□□□ -1.7
PTCD1O75127 AC112693.2-201ENST00000556538 232 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.42□□□□□ -1.7
PTCD1O75127 KLKP1-201ENST00000595979 403 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 AL162713.1-201ENST00000604480 262 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 AL357075.2-201ENST00000614906 189 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 AC002076.2-201ENST00000617362 122 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PTCD1O75127 AL365361.1-201ENST00000566942 3481 ntBASIC4.41□□□□□ -1.7
PTCD1O75127 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.41□□□□□ -1.7
PTCD1O75127 RNA5SP197-201ENST00000363357 119 ntBASIC4.41□□□□□ -1.7
PTCD1O75127 RNA5SP42-201ENST00000364278 115 ntBASIC4.41□□□□□ -1.7
PTCD1O75127 RNU6-487P-201ENST00000365430 104 ntBASIC4.41□□□□□ -1.7
PTCD1O75127 AC112220.1-201ENST00000434628 355 ntBASIC4.41□□□□□ -1.7
PTCD1O75127 POLR2KP2-201ENST00000438155 177 ntBASIC4.41□□□□□ -1.7
PTCD1O75127 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.41□□□□□ -1.7
PTCD1O75127 RN7SL594P-201ENST00000470590 287 ntBASIC4.41□□□□□ -1.7
PTCD1O75127 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.41□□□□□ -1.7
PTCD1O75127 AC025445.1-201ENST00000502728 300 ntBASIC4.41□□□□□ -1.7
PTCD1O75127 PDCD5P2-201ENST00000507570 312 ntBASIC4.41□□□□□ -1.7
PTCD1O75127 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.41□□□□□ -1.7
PTCD1O75127 RNU6-971P-201ENST00000516920 106 ntBASIC4.41□□□□□ -1.7
PTCD1O75127 AC115990.1-201ENST00000526957 301 ntBASIC4.41□□□□□ -1.7
PTCD1O75127 MIR6076-201ENST00000617521 113 ntBASIC4.41□□□□□ -1.7
PTCD1O75127 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PTCD1O75127 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCD1O75127 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTCD1O75127 Z83843.1-201ENST00000604070 3685 ntBASIC4.41□□□□□ -1.7
PTCD1O75127 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.41□□□□□ -1.7
PTCD1O75127 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PTCD1O75127 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.4□□□□□ -1.7
PTCD1O75127 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.4□□□□□ -1.7
PTCD1O75127 AC018555.1-201ENST00000567548 1980 ntBASIC4.4□□□□□ -1.7
PTCD1O75127 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
PTCD1O75127 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.4□□□□□ -1.7
PTCD1O75127 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
PTCD1O75127 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.4□□□□□ -1.71
PTCD1O75127 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.4□□□□□ -1.71
PTCD1O75127 RNU5F-3P-201ENST00000363767 117 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 SNORA72.2-201ENST00000365028 127 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 SNORA26.3-201ENST00000391119 136 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 RNU2-37P-201ENST00000410695 177 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 RNA5SP39-201ENST00000411245 120 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 AC006028.1-201ENST00000438379 402 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 AC010469.1-201ENST00000463864 576 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 RNU6-1333P-201ENST00000516162 93 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 SNORA27.4-201ENST00000516650 95 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.4□□□□□ -1.71
PTCD1O75127 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.4□□□□□ -1.71
PTCD1O75127 AC105137.2-201ENST00000569073 466 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 MIR4325-201ENST00000583049 90 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.4□□□□□ -1.71
PTCD1O75127 AC005828.6-201ENST00000606610 232 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 AC073349.3-201ENST00000617616 186 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 SNORD98-201ENST00000636377 67 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTCD1O75127 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTCD1O75127 AC002543.1-201ENST00000299783 1954 ntBASIC4.4□□□□□ -1.71
PTCD1O75127 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PTCD1O75127 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.39□□□□□ -1.71
PTCD1O75127 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
PTCD1O75127 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.39□□□□□ -1.71
PTCD1O75127 MIR410-201ENST00000362222 80 ntBASIC4.39□□□□□ -1.71
PTCD1O75127 SNORA63.4-201ENST00000362763 126 ntBASIC4.39□□□□□ -1.71
PTCD1O75127 RNU6-653P-201ENST00000363074 106 ntBASIC4.39□□□□□ -1.71
PTCD1O75127 RN7SKP111-201ENST00000410349 271 ntBASIC4.39□□□□□ -1.71
PTCD1O75127 RPS26P42-201ENST00000413485 326 ntBASIC4.39□□□□□ -1.71
PTCD1O75127 PTGES3P4-201ENST00000426243 356 ntBASIC4.39□□□□□ -1.71
PTCD1O75127 RPS15AP5-201ENST00000436276 388 ntBASIC4.39□□□□□ -1.71
PTCD1O75127 AC007395.1-201ENST00000451333 677 ntBASIC4.39□□□□□ -1.71
PTCD1O75127 HMGB3P3-201ENST00000510526 400 ntBASIC4.39□□□□□ -1.71
PTCD1O75127 MIR5004-201ENST00000579078 107 ntBASIC4.39□□□□□ -1.71
PTCD1O75127 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.39□□□□□ -1.71
PTCD1O75127 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.39□□□□□ -1.71
PTCD1O75127 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTCD1O75127 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTCD1O75127 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTCD1O75127 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCD1O75127 MTND5P35-201ENST00000557537 1720 ntBASIC4.38□□□□□ -1.71
PTCD1O75127 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTCD1O75127 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTCD1O75127 Y_RNA.43-201ENST00000362670 111 ntBASIC4.38□□□□□ -1.71
PTCD1O75127 Y_RNA.127-201ENST00000363386 109 ntBASIC4.38□□□□□ -1.71
PTCD1O75127 Y_RNA.179-201ENST00000363844 90 ntBASIC4.38□□□□□ -1.71
PTCD1O75127 RNU4-56P-201ENST00000364700 142 ntBASIC4.38□□□□□ -1.71
PTCD1O75127 RNU6-19P-201ENST00000384718 107 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms