Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC010487.4-201ENST00000637027 61 ntBASIC1.02□□□□□ -2.25
SHOX2O60902 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
SHOX2O60902 RNU6-43P-201ENST00000384302 107 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 RNU6-45P-201ENST00000384471 107 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 RPL23AP32-201ENST00000395315 459 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 MRPL35P1-201ENST00000404272 572 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 RN7SKP61-201ENST00000410642 295 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 RNU6-293P-201ENST00000411259 106 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.01□□□□□ -2.25
SHOX2O60902 AL590135.1-201ENST00000422215 156 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SHOX2O60902 AC019205.3-201ENST00000424573 156 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 AL365184.2-201ENST00000431139 435 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 AC000111.3-201ENST00000433478 193 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 AC016700.2-201ENST00000446011 156 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.01□□□□□ -2.25
SHOX2O60902 OR2AQ1P-201ENST00000451972 200 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 RNU6-1132P-201ENST00000459214 107 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 AC015911.1-201ENST00000495111 156 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 AC116562.3-201ENST00000506136 177 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 RNA5SP437-201ENST00000517249 129 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 AC068587.5-201ENST00000528506 175 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 AC109446.1-201ENST00000566172 220 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 AC015688.6-201ENST00000577737 104 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 MIR3923-201ENST00000579521 83 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 MIR8087-201ENST00000612745 78 ntBASIC1.01□□□□□ -2.25
SHOX2O60902 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
SHOX2O60902 AC092268.1-201ENST00000342691 405 ntBASIC1□□□□□ -2.25
SHOX2O60902 U3.4-201ENST00000363352 213 ntBASIC1□□□□□ -2.25
SHOX2O60902 SNORD114-27-201ENST00000363766 70 ntBASIC1□□□□□ -2.25
SHOX2O60902 U3.9-201ENST00000363823 204 ntBASIC1□□□□□ -2.25
SHOX2O60902 SNORD31B-201ENST00000364977 69 ntBASIC1□□□□□ -2.25
SHOX2O60902 Y_RNA.549-201ENST00000384657 102 ntBASIC1□□□□□ -2.25
SHOX2O60902 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
SHOX2O60902 RNA5SP201-201ENST00000410316 124 ntBASIC1□□□□□ -2.25
SHOX2O60902 AL161935.2-201ENST00000414627 60 ntBASIC1□□□□□ -2.25
SHOX2O60902 ARL5AP1-201ENST00000418991 388 ntBASIC1□□□□□ -2.25
SHOX2O60902 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1□□□□□ -2.25
SHOX2O60902 AC245047.4-201ENST00000433189 144 ntBASIC1□□□□□ -2.25
SHOX2O60902 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1□□□□□ -2.25
SHOX2O60902 AL606662.1-201ENST00000445763 553 ntBASIC1□□□□□ -2.25
SHOX2O60902 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1□□□□□ -2.25
SHOX2O60902 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1□□□□□ -2.25
SHOX2O60902 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1□□□□□ -2.25
SHOX2O60902 Y_RNA.672-201ENST00000516289 104 ntBASIC1□□□□□ -2.25
SHOX2O60902 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1□□□□□ -2.25
SHOX2O60902 AC080078.3-201ENST00000605407 463 ntBASIC1□□□□□ -2.25
SHOX2O60902 AL020996.3-201ENST00000606617 222 ntBASIC1□□□□□ -2.25
SHOX2O60902 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1□□□□□ -2.25
SHOX2O60902 AL159152.1-201ENST00000635019 2587 ntBASIC1□□□□□ -2.25
SHOX2O60902 SNORA63D-201ENST00000364359 132 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 Y_RNA.324-201ENST00000365165 102 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 RNU6-1176P-201ENST00000390955 107 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 AC010975.2-201ENST00000427781 588 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 MTCO3P29-201ENST00000432119 779 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 AC016925.1-201ENST00000458303 298 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.99□□□□□ -2.25
SHOX2O60902 RNU7-40P-201ENST00000516397 64 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 RNU6-113P-201ENST00000516653 101 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SHOX2O60902 AC022616.3-201ENST00000523940 148 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 AC023050.3-201ENST00000541142 333 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 HMGN1P30-201ENST00000589286 268 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 AC012507.3-201ENST00000603556 477 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 MTND5P17-201ENST00000418405 1603 ntBASIC0.99□□□□□ -2.25
SHOX2O60902 MIR330-201ENST00000362196 94 ntBASIC0.98□□□□□ -2.25
SHOX2O60902 Y_RNA.576-201ENST00000384781 102 ntBASIC0.98□□□□□ -2.25
SHOX2O60902 SNORA26.3-201ENST00000391119 136 ntBASIC0.98□□□□□ -2.25
SHOX2O60902 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.98□□□□□ -2.25
SHOX2O60902 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.98□□□□□ -2.25
SHOX2O60902 AC099677.2-201ENST00000436385 175 ntBASIC0.98□□□□□ -2.25
SHOX2O60902 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.98□□□□□ -2.25
SHOX2O60902 AL009048.1-201ENST00000450437 298 ntBASIC0.98□□□□□ -2.25
SHOX2O60902 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.98□□□□□ -2.25
SHOX2O60902 SNRPGP7-201ENST00000469016 106 ntBASIC0.98□□□□□ -2.25
SHOX2O60902 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.98□□□□□ -2.25
SHOX2O60902 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.98□□□□□ -2.25
SHOX2O60902 RNU5F-4P-201ENST00000516581 114 ntBASIC0.98□□□□□ -2.25
SHOX2O60902 RNU6-567P-201ENST00000516746 107 ntBASIC0.98□□□□□ -2.25
SHOX2O60902 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.98□□□□□ -2.25
SHOX2O60902 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.98□□□□□ -2.25
SHOX2O60902 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
SHOX2O60902 HSPE1P19-201ENST00000603327 295 ntBASIC0.98□□□□□ -2.25
SHOX2O60902 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.98□□□□□ -2.25
SHOX2O60902 AC126177.8-201ENST00000618339 1015 ntBASIC0.98□□□□□ -2.25
SHOX2O60902 RNA5SP327-201ENST00000362494 101 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 Y_RNA.60-201ENST00000362831 98 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 SNORD113-6-201ENST00000363345 75 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 RNA5SP331-201ENST00000364986 107 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 SNORD115-7-201ENST00000365306 82 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 RNU6-716P-201ENST00000365621 103 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 SNORA20.2-201ENST00000383922 131 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 RNU6-116P-201ENST00000384042 109 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 MIR548B-201ENST00000385247 97 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 AL008987.1-201ENST00000415528 237 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 AC106883.1-201ENST00000418805 562 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 AC098592.1-201ENST00000419352 333 ntBASIC0.97□□□□□ -2.25
SHOX2O60902 SNX2P2-201ENST00000424553 323 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms