Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
LDB2O43679 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LDB2O43679 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.58□□□□□ -2
LDB2O43679 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
LDB2O43679 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.58□□□□□ -2
LDB2O43679 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.58□□□□□ -2
LDB2O43679 Y_RNA.145-201ENST00000363527 102 ntBASIC2.58□□□□□ -2
LDB2O43679 SNORD56.5-201ENST00000364281 72 ntBASIC2.58□□□□□ -2
LDB2O43679 RNU4-42P-201ENST00000364738 142 ntBASIC2.58□□□□□ -2
LDB2O43679 SNORA26.3-201ENST00000391119 136 ntBASIC2.58□□□□□ -2
LDB2O43679 RNU6-1140P-201ENST00000410517 106 ntBASIC2.58□□□□□ -2
LDB2O43679 AL513477.1-202ENST00000417061 214 ntBASIC2.58□□□□□ -2
LDB2O43679 AC009414.1-201ENST00000427200 443 ntBASIC2.58□□□□□ -2
LDB2O43679 AC244670.1-201ENST00000436879 112 ntBASIC2.58□□□□□ -2
LDB2O43679 GPM6BP3-201ENST00000442797 145 ntBASIC2.58□□□□□ -2
LDB2O43679 AL353705.4-201ENST00000449661 238 ntBASIC2.58□□□□□ -2
LDB2O43679 AP001324.2-201ENST00000461163 319 ntBASIC2.58□□□□□ -2
LDB2O43679 RPL23AP75-201ENST00000491601 451 ntBASIC2.58□□□□□ -2
LDB2O43679 RNU7-175P-201ENST00000515915 61 ntBASIC2.58□□□□□ -2
LDB2O43679 AC115990.1-201ENST00000526957 301 ntBASIC2.58□□□□□ -2
LDB2O43679 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.58□□□□□ -2
LDB2O43679 AC007375.1-201ENST00000554513 578 ntBASIC2.58□□□□□ -2
LDB2O43679 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.58□□□□□ -2
LDB2O43679 MIR5571-201ENST00000577998 113 ntBASIC2.58□□□□□ -2
LDB2O43679 MIR4680-201ENST00000580906 66 ntBASIC2.58□□□□□ -2
LDB2O43679 RPL23AP88-201ENST00000605759 454 ntBASIC2.58□□□□□ -2
LDB2O43679 AC100812.1-201ENST00000607622 580 ntBASIC2.58□□□□□ -2
LDB2O43679 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.58□□□□□ -2
LDB2O43679 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.58□□□□□ -2
LDB2O43679 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.58□□□□□ -2
LDB2O43679 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.58□□□□□ -2
LDB2O43679 AC005592.1-201ENST00000566527 1640 ntBASIC2.57□□□□□ -2
LDB2O43679 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LDB2O43679 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.57□□□□□ -2
LDB2O43679 SNORD114-19-201ENST00000363072 75 ntBASIC2.57□□□□□ -2
LDB2O43679 SNORA29-201ENST00000384183 140 ntBASIC2.57□□□□□ -2
LDB2O43679 RPL21P75-201ENST00000396599 483 ntBASIC2.57□□□□□ -2
LDB2O43679 RPL21P28-201ENST00000401418 483 ntBASIC2.57□□□□□ -2
LDB2O43679 FO393413.1-201ENST00000402892 195 ntBASIC2.57□□□□□ -2
LDB2O43679 AC138623.1-201ENST00000418060 216 ntBASIC2.57□□□□□ -2
LDB2O43679 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.57□□□□□ -2
LDB2O43679 AL358075.3-201ENST00000426289 226 ntBASIC2.57□□□□□ -2
LDB2O43679 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.57□□□□□ -2
LDB2O43679 MTCO3P29-201ENST00000432119 779 ntBASIC2.57□□□□□ -2
LDB2O43679 snoU13.30-201ENST00000458951 104 ntBASIC2.57□□□□□ -2
LDB2O43679 RPL21P39-201ENST00000463605 483 ntBASIC2.57□□□□□ -2
LDB2O43679 AC087190.1-201ENST00000484462 480 ntBASIC2.57□□□□□ -2
LDB2O43679 RPL30P1-201ENST00000488676 339 ntBASIC2.57□□□□□ -2
LDB2O43679 AC093591.1-201ENST00000491435 481 ntBASIC2.57□□□□□ -2
LDB2O43679 RPL21P16-201ENST00000495531 483 ntBASIC2.57□□□□□ -2
LDB2O43679 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.57□□□□□ -2
LDB2O43679 Y_RNA.706-201ENST00000516933 99 ntBASIC2.57□□□□□ -2
LDB2O43679 AC109329.1-201ENST00000518744 317 ntBASIC2.57□□□□□ -2
LDB2O43679 AC144568.1-201ENST00000520139 137 ntBASIC2.57□□□□□ -2
LDB2O43679 AC021231.3-201ENST00000558497 370 ntBASIC2.57□□□□□ -2
LDB2O43679 AL159153.1-201ENST00000619688 317 ntBASIC2.57□□□□□ -2
LDB2O43679 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.57□□□□□ -2
LDB2O43679 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.57□□□□□ -2
LDB2O43679 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.57□□□□□ -2
LDB2O43679 MIR4272-201ENST00000635924 64 ntBASIC2.57□□□□□ -2
LDB2O43679 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.57□□□□□ -2
LDB2O43679 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.57□□□□□ -2
LDB2O43679 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.57□□□□□ -2
LDB2O43679 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.57□□□□□ -2
LDB2O43679 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.56□□□□□ -2
LDB2O43679 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.56□□□□□ -2
LDB2O43679 AC026241.1-201ENST00000517873 2142 ntBASIC2.56□□□□□ -2
LDB2O43679 RNU5B-2P-201ENST00000363036 113 ntBASIC2.56□□□□□ -2
LDB2O43679 SNORD115-32-201ENST00000364079 82 ntBASIC2.56□□□□□ -2
LDB2O43679 Y_RNA.405-201ENST00000383979 100 ntBASIC2.56□□□□□ -2
LDB2O43679 Y_RNA.451-201ENST00000384200 100 ntBASIC2.56□□□□□ -2
LDB2O43679 Y_RNA.524-201ENST00000384564 100 ntBASIC2.56□□□□□ -2
LDB2O43679 Y_RNA.561-201ENST00000384694 100 ntBASIC2.56□□□□□ -2
LDB2O43679 MIR190B-201ENST00000401119 79 ntBASIC2.56□□□□□ -2
LDB2O43679 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.56□□□□□ -2
LDB2O43679 Z82188.1-201ENST00000436709 154 ntBASIC2.56□□□□□ -2
LDB2O43679 AC009296.1-201ENST00000443146 155 ntBASIC2.56□□□□□ -2
LDB2O43679 AL353752.1-201ENST00000454946 260 ntBASIC2.56□□□□□ -2
LDB2O43679 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.56□□□□□ -2
LDB2O43679 AF186996.7-201ENST00000492781 209 ntBASIC2.56□□□□□ -2
LDB2O43679 AC015911.1-201ENST00000495111 156 ntBASIC2.56□□□□□ -2
LDB2O43679 RNU6-1137P-201ENST00000517073 99 ntBASIC2.56□□□□□ -2
LDB2O43679 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.56□□□□□ -2
LDB2O43679 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.56□□□□□ -2
LDB2O43679 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.56□□□□□ -2
LDB2O43679 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.56□□□□□ -2
LDB2O43679 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.56□□□□□ -2
LDB2O43679 MIR5092-201ENST00000583139 88 ntBASIC2.56□□□□□ -2
LDB2O43679 AC010928.2-201ENST00000588017 287 ntBASIC2.56□□□□□ -2
LDB2O43679 SNORD58B-201ENST00000607313 66 ntBASIC2.56□□□□□ -2
LDB2O43679 AL359198.2-201ENST00000611836 194 ntBASIC2.56□□□□□ -2
LDB2O43679 AC087588.2-201ENST00000617667 426 ntBASIC2.56□□□□□ -2
LDB2O43679 UCA1.1-201ENST00000620952 75 ntBASIC2.56□□□□□ -2
LDB2O43679 AC138305.3-201ENST00000624988 240 ntBASIC2.56□□□□□ -2
LDB2O43679 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.56□□□□□ -2
LDB2O43679 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
LDB2O43679 AL109809.4-201ENST00000603520 2185 ntBASIC2.56□□□□□ -2
LDB2O43679 RNU6-1180P-201ENST00000364935 107 ntBASIC2.55□□□□□ -2
LDB2O43679 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
LDB2O43679 RNU6-301P-201ENST00000384277 107 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms