Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.68□□□□□ -1.82
SRGAP3O43295 AL162424.1-201ENST00000602325 221 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SRGAP3O43295 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SRGAP3O43295 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SRGAP3O43295 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SRGAP3O43295 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SRGAP3O43295 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.67□□□□□ -1.82
SRGAP3O43295 RNU6-740P-201ENST00000364734 105 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 RNU1-73P-201ENST00000383971 164 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 RNU6-217P-201ENST00000384164 104 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 RNU6-1001P-201ENST00000411265 100 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 Z92545.1-201ENST00000411782 234 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 RPL26P27-201ENST00000414397 437 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.67□□□□□ -1.82
SRGAP3O43295 WARS2P1-201ENST00000429678 537 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 AC009969.1-201ENST00000438726 172 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 AC096638.1-201ENST00000444678 216 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 HMGN2P7-201ENST00000456186 273 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 AC073901.1-201ENST00000462471 408 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 RPL30P5-201ENST00000494923 336 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 SNORD116-28-201ENST00000516123 91 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 Y_RNA.679-201ENST00000516416 91 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 RNU6-861P-201ENST00000516745 106 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 AL451007.1-201ENST00000595491 289 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 Z83818.1-201ENST00000603584 150 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.67□□□□□ -1.82
SRGAP3O43295 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SRGAP3O43295 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SRGAP3O43295 AL035425.3-201ENST00000564206 4996 ntBASIC3.67□□□□□ -1.82
SRGAP3O43295 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SRGAP3O43295 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SRGAP3O43295 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SRGAP3O43295 MIR487A-201ENST00000385009 80 ntBASIC3.66□□□□□ -1.82
SRGAP3O43295 Y_RNA.590-201ENST00000410140 107 ntBASIC3.66□□□□□ -1.82
SRGAP3O43295 RNU5A-5P-201ENST00000411054 116 ntBASIC3.66□□□□□ -1.82
SRGAP3O43295 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.66□□□□□ -1.82
SRGAP3O43295 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.66□□□□□ -1.82
SRGAP3O43295 RPL23AP62-201ENST00000463396 453 ntBASIC3.66□□□□□ -1.82
SRGAP3O43295 AC078918.1-201ENST00000498515 228 ntBASIC3.66□□□□□ -1.82
SRGAP3O43295 AC027288.2-201ENST00000553028 243 ntBASIC3.66□□□□□ -1.82
SRGAP3O43295 AC019159.1-201ENST00000605094 187 ntBASIC3.66□□□□□ -1.82
SRGAP3O43295 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.66□□□□□ -1.82
SRGAP3O43295 U2.21-201ENST00000637295 81 ntBASIC3.66□□□□□ -1.82
SRGAP3O43295 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.66□□□□□ -1.82
SRGAP3O43295 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SRGAP3O43295 AC135776.4-201ENST00000624300 1904 ntBASIC3.66□□□□□ -1.82
SRGAP3O43295 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.66□□□□□ -1.82
SRGAP3O43295 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.66□□□□□ -1.82
SRGAP3O43295 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.65□□□□□ -1.82
SRGAP3O43295 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
SRGAP3O43295 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SRGAP3O43295 RNU6-778P-201ENST00000363269 103 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 RNU6-1020P-201ENST00000363684 107 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 RNU6-682P-201ENST00000363843 106 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 RNU6-884P-201ENST00000363889 107 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 SNORD32A-201ENST00000364805 84 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 Y_RNA.292-201ENST00000364904 97 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 MIR10B-201ENST00000385011 110 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 RNA5SP213-201ENST00000391031 106 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 EEF1A1P41-201ENST00000414667 207 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 AL139132.1-201ENST00000431587 344 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.65□□□□□ -1.83
SRGAP3O43295 GPM6BP3-201ENST00000442797 145 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 RN7SL75P-201ENST00000461926 281 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 RPS4XP13-201ENST00000483219 789 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 AC074198.2-201ENST00000508153 258 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 RNA5SP309-201ENST00000516670 106 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 RN7SKP49-201ENST00000516675 260 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 AC022559.1-201ENST00000520905 205 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 HSPE1P4-201ENST00000550617 308 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 AC093732.2-201ENST00000607950 274 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 SNORA43.4-201ENST00000629559 138 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.65□□□□□ -1.83
SRGAP3O43295 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.65□□□□□ -1.83
SRGAP3O43295 IGHVIII-44-202ENST00000636235 289 ntBASIC3.65□□□□□ -1.83
SRGAP3O43295 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SRGAP3O43295 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SRGAP3O43295 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SRGAP3O43295 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SRGAP3O43295 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRGAP3O43295 RNU1-100P-201ENST00000365255 165 ntBASIC3.64□□□□□ -1.83
SRGAP3O43295 RNU6-47P-201ENST00000383866 107 ntBASIC3.64□□□□□ -1.83
SRGAP3O43295 Y_RNA.506-201ENST00000384494 102 ntBASIC3.64□□□□□ -1.83
SRGAP3O43295 RNU6-125P-201ENST00000384505 107 ntBASIC3.64□□□□□ -1.83
SRGAP3O43295 MIR544A-201ENST00000384855 91 ntBASIC3.64□□□□□ -1.83
SRGAP3O43295 MIR607-201ENST00000385241 96 ntBASIC3.64□□□□□ -1.83
SRGAP3O43295 RPL21P3-201ENST00000395517 478 ntBASIC3.64□□□□□ -1.83
SRGAP3O43295 RNU6-651P-201ENST00000411040 105 ntBASIC3.64□□□□□ -1.83
SRGAP3O43295 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.64□□□□□ -1.83
SRGAP3O43295 AC146507.2-201ENST00000460608 476 ntBASIC3.64□□□□□ -1.83
SRGAP3O43295 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.64□□□□□ -1.83
SRGAP3O43295 RPL26P26-201ENST00000480251 434 ntBASIC3.64□□□□□ -1.83
SRGAP3O43295 RN7SKP43-201ENST00000516173 320 ntBASIC3.64□□□□□ -1.83
SRGAP3O43295 Y_RNA.683-201ENST00000516508 93 ntBASIC3.64□□□□□ -1.83
SRGAP3O43295 RNU6-567P-201ENST00000516746 107 ntBASIC3.64□□□□□ -1.83
SRGAP3O43295 U6.98-201ENST00000637157 84 ntBASIC3.64□□□□□ -1.83
SRGAP3O43295 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms