Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.31□□□□□ -2.36
HMGB3O15347 AL133396.1-201ENST00000432048 687 ntBASIC0.31□□□□□ -2.36
HMGB3O15347 AC002486.1-201ENST00000435098 391 ntBASIC0.31□□□□□ -2.36
HMGB3O15347 Z73417.1-201ENST00000447373 778 ntBASIC0.31□□□□□ -2.36
HMGB3O15347 GAPDHP17-201ENST00000449858 1001 ntBASIC0.31□□□□□ -2.36
HMGB3O15347 SRRM1P2-201ENST00000464531 1192 ntBASIC0.31□□□□□ -2.36
HMGB3O15347 SNRPGP7-201ENST00000469016 106 ntBASIC0.31□□□□□ -2.36
HMGB3O15347 AC024995.1-201ENST00000523014 93 ntBASIC0.31□□□□□ -2.36
HMGB3O15347 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.31□□□□□ -2.36
HMGB3O15347 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.31□□□□□ -2.36
HMGB3O15347 AC008015.1-201ENST00000555505 465 ntBASIC0.31□□□□□ -2.36
HMGB3O15347 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.31□□□□□ -2.36
HMGB3O15347 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.31□□□□□ -2.36
HMGB3O15347 AC073539.2-201ENST00000597113 165 ntBASIC0.31□□□□□ -2.36
HMGB3O15347 AC121334.2-201ENST00000605387 271 ntBASIC0.31□□□□□ -2.36
HMGB3O15347 AC016727.1-205ENST00000605437 569 ntBASIC0.31□□□□□ -2.36
HMGB3O15347 AC012557.2-201ENST00000605919 418 ntBASIC0.31□□□□□ -2.36
HMGB3O15347 AC009994.1-201ENST00000606889 253 ntBASIC0.31□□□□□ -2.36
HMGB3O15347 AC005520.5-201ENST00000613926 164 ntBASIC0.31□□□□□ -2.36
HMGB3O15347 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.31□□□□□ -2.36
HMGB3O15347 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
HMGB3O15347 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.3□□□□□ -2.36
HMGB3O15347 RNU6-545P-201ENST00000362681 104 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 MIR653-201ENST00000385279 96 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 AC010154.1-201ENST00000425857 269 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 USP9YP28-201ENST00000435142 589 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 FABP5P4-201ENST00000437203 171 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 HMGN2P34-201ENST00000437647 269 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.3□□□□□ -2.36
HMGB3O15347 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.3□□□□□ -2.36
HMGB3O15347 AC112206.4-201ENST00000515142 405 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 RNU6-377P-201ENST00000515965 102 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 RNU4-57P-201ENST00000515980 135 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.3□□□□□ -2.36
HMGB3O15347 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.3□□□□□ -2.36
HMGB3O15347 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.3□□□□□ -2.36
HMGB3O15347 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.3□□□□□ -2.36
HMGB3O15347 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.3□□□□□ -2.36
HMGB3O15347 AC008521.1-201ENST00000587471 187 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.3□□□□□ -2.36
HMGB3O15347 RNU6-1192P-201ENST00000612197 107 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 RNU6-489P-201ENST00000618289 107 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 AL157786.1-207ENST00000627771 695 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 AL450472.1-202ENST00000637286 180 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 AC099786.3-201ENST00000565735 1410 ntBASIC0.3□□□□□ -2.36
HMGB3O15347 SNORD56.2-201ENST00000363242 71 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 SNORD116.1-201ENST00000365628 92 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 SNORD41-201ENST00000386967 70 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 MIR300-201ENST00000401138 83 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 AC098934.3-201ENST00000430450 190 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 HSFY7P-201ENST00000432672 318 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 HSFY8P-201ENST00000437934 318 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 RPEP5-201ENST00000441137 268 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 AL606517.2-201ENST00000442855 241 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGB3O15347 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.29□□□□□ -2.36
HMGB3O15347 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGB3O15347 CYP3A137P-201ENST00000562436 69 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 AC109446.2-201ENST00000567872 497 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 AC090517.1-201ENST00000569307 266 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 AC080078.2-201ENST00000603766 501 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 AC112187.2-201ENST00000604345 283 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 Z98751.3-201ENST00000604447 521 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 AL592221.1-201ENST00000605266 382 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 snoU13.31-201ENST00000607291 104 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
HMGB3O15347 CASC19-280ENST00000642102 1351 ntBASIC0.29□□□□□ -2.36
HMGB3O15347 SNORA24.1-201ENST00000384401 135 ntBASIC0.28□□□□□ -2.36
HMGB3O15347 AL031577.2-201ENST00000404133 280 ntBASIC0.28□□□□□ -2.36
HMGB3O15347 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.28□□□□□ -2.36
HMGB3O15347 RNU7-90P-201ENST00000459216 62 ntBASIC0.28□□□□□ -2.36
HMGB3O15347 RBBP4P6-201ENST00000508098 202 ntBASIC0.28□□□□□ -2.36
HMGB3O15347 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.28□□□□□ -2.36
HMGB3O15347 MIR4714-201ENST00000580728 77 ntBASIC0.28□□□□□ -2.36
HMGB3O15347 PRELID3BP2-201ENST00000605362 201 ntBASIC0.28□□□□□ -2.36
HMGB3O15347 AL359821.1-201ENST00000605519 182 ntBASIC0.28□□□□□ -2.36
HMGB3O15347 AC097478.2-201ENST00000610572 514 ntBASIC0.28□□□□□ -2.36
HMGB3O15347 AL513423.1-201ENST00000621695 132 ntBASIC0.28□□□□□ -2.36
HMGB3O15347 MTND4P5-201ENST00000435821 1374 ntBASIC0.28□□□□□ -2.36
HMGB3O15347 RNU6-562P-201ENST00000362731 107 ntBASIC0.27□□□□□ -2.37
HMGB3O15347 RNU6-336P-201ENST00000364891 107 ntBASIC0.27□□□□□ -2.37
HMGB3O15347 MIR1283-1-201ENST00000408494 87 ntBASIC0.27□□□□□ -2.37
HMGB3O15347 RN7SKP200-201ENST00000410564 320 ntBASIC0.27□□□□□ -2.37
HMGB3O15347 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.27□□□□□ -2.37
HMGB3O15347 AC000111.3-201ENST00000433478 193 ntBASIC0.27□□□□□ -2.37
HMGB3O15347 AL606662.1-201ENST00000445763 553 ntBASIC0.27□□□□□ -2.37
HMGB3O15347 AC013470.1-201ENST00000453438 462 ntBASIC0.27□□□□□ -2.37
HMGB3O15347 RNU6-1146P-201ENST00000516282 102 ntBASIC0.27□□□□□ -2.37
HMGB3O15347 AC022616.6-201ENST00000520479 119 ntBASIC0.27□□□□□ -2.37
HMGB3O15347 MTATP6P15-201ENST00000527233 835 ntBASIC0.27□□□□□ -2.37
HMGB3O15347 AC007834.2-201ENST00000536310 343 ntBASIC0.27□□□□□ -2.37
HMGB3O15347 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.27□□□□□ -2.37
HMGB3O15347 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.27□□□□□ -2.37
HMGB3O15347 AC106754.2-201ENST00000623006 233 ntBASIC0.27□□□□□ -2.37
HMGB3O15347 RNU6-552P-201ENST00000362869 119 ntBASIC0.26□□□□□ -2.37
HMGB3O15347 Y_RNA.287-201ENST00000364853 94 ntBASIC0.26□□□□□ -2.37
HMGB3O15347 RNU6-1335P-201ENST00000365426 107 ntBASIC0.26□□□□□ -2.37
HMGB3O15347 RNU6-1235P-201ENST00000384559 107 ntBASIC0.26□□□□□ -2.37
HMGB3O15347 AC007283.2-201ENST00000424739 197 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms