Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RNU6-567P-201ENST00000516746 107 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 AC026371.1-201ENST00000551867 419 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 BNIP3P25-201ENST00000596023 559 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 AC078795.3-201ENST00000602913 472 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 AP000654.2-201ENST00000605633 586 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.81□□□□□ -2.12
PDLIM1O00151 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 MIR1248-201ENST00000629190 106 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PDLIM1O00151 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.8□□□□□ -2.12
PDLIM1O00151 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PDLIM1O00151 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PDLIM1O00151 RNU6-451P-201ENST00000362921 107 ntBASIC1.8□□□□□ -2.12
PDLIM1O00151 RNU6-1252P-201ENST00000363054 104 ntBASIC1.8□□□□□ -2.12
PDLIM1O00151 RNY4P14-201ENST00000363656 96 ntBASIC1.8□□□□□ -2.12
PDLIM1O00151 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PDLIM1O00151 SNORA36A-201ENST00000384221 132 ntBASIC1.8□□□□□ -2.12
PDLIM1O00151 RNU2-20P-201ENST00000410425 191 ntBASIC1.8□□□□□ -2.12
PDLIM1O00151 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.8□□□□□ -2.12
PDLIM1O00151 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.8□□□□□ -2.12
PDLIM1O00151 C8orf59P1-201ENST00000429930 303 ntBASIC1.8□□□□□ -2.12
PDLIM1O00151 NDUFA5P4-201ENST00000436704 385 ntBASIC1.8□□□□□ -2.12
PDLIM1O00151 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.8□□□□□ -2.12
PDLIM1O00151 AC114801.2-201ENST00000503825 781 ntBASIC1.8□□□□□ -2.12
PDLIM1O00151 AC096745.1-201ENST00000509945 370 ntBASIC1.8□□□□□ -2.12
PDLIM1O00151 PTP4A1P4-201ENST00000512479 322 ntBASIC1.8□□□□□ -2.12
PDLIM1O00151 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.8□□□□□ -2.12
PDLIM1O00151 AC021231.3-201ENST00000558497 370 ntBASIC1.8□□□□□ -2.12
PDLIM1O00151 AC024614.3-201ENST00000637860 256 ntBASIC1.8□□□□□ -2.12
PDLIM1O00151 SNORD114-1-201ENST00000362705 72 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 RNU6-254P-201ENST00000363377 107 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 SNORD113-7-201ENST00000363762 77 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 RNU6-877P-201ENST00000383868 107 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 RNU6-26P-201ENST00000383985 107 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 RNU6-933P-201ENST00000384424 107 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 Y_RNA.573-201ENST00000384763 105 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 MIR518A2-201ENST00000384966 87 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 MTCO1P21-201ENST00000416634 589 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 AL158823.1-201ENST00000418441 478 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 UBE2V1P4-201ENST00000425374 344 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 AL513124.1-201ENST00000450410 614 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 AC132942.1-201ENST00000486753 483 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.79□□□□□ -2.12
PDLIM1O00151 TPRKBP2-201ENST00000565969 475 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 MIR4299-201ENST00000577899 72 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.79□□□□□ -2.12
PDLIM1O00151 AL078605.1-201ENST00000603529 500 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 Z98751.3-201ENST00000604447 521 ntBASIC1.79□□□□□ -2.12
PDLIM1O00151 U3.9-201ENST00000363823 204 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 SNORD32B-201ENST00000364460 84 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 Y_RNA.256-201ENST00000364594 104 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 Y_RNA.450-201ENST00000384198 113 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 Y_RNA.453-201ENST00000384223 109 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 MIR521-1-201ENST00000384902 87 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 SNORA26.3-201ENST00000391119 136 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 MTCYBP2-201ENST00000407745 171 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 MIR1262-201ENST00000408276 93 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 RNU6-325P-201ENST00000411132 105 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 SRIP3-201ENST00000413200 219 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 EIF1AXP1-201ENST00000419267 435 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 AC096920.1-201ENST00000423991 241 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 AL121890.1-201ENST00000435457 205 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 MTND1P34-201ENST00000438556 671 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.78□□□□□ -2.12
PDLIM1O00151 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.78□□□□□ -2.12
PDLIM1O00151 RPL23AP3-201ENST00000453844 468 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.78□□□□□ -2.12
PDLIM1O00151 snoU13.15-201ENST00000459407 104 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 UBL5P3-201ENST00000475112 231 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 AC093259.1-201ENST00000509755 300 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 RNU6-991P-201ENST00000516168 107 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 Y_RNA.665-201ENST00000516177 98 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 RNU6-970P-201ENST00000516312 107 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 SCOCP1-201ENST00000554676 349 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.78□□□□□ -2.12
PDLIM1O00151 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.78□□□□□ -2.12
PDLIM1O00151 CYP4A27P-201ENST00000567218 190 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.78□□□□□ -2.12
PDLIM1O00151 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.78□□□□□ -2.12
PDLIM1O00151 AC100830.2-201ENST00000581636 240 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 CTHRC1P1-201ENST00000605383 469 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 AC025754.2-201ENST00000606491 432 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 PCGEM1.1-201ENST00000613431 131 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 FAM157A-202ENST00000615155 405 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 AC139792.2-201ENST00000624218 587 ntBASIC1.78□□□□□ -2.12
PDLIM1O00151 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
PDLIM1O00151 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
PDLIM1O00151 SNORD48-201ENST00000364953 64 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 RNU6-378P-201ENST00000384324 107 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 MIR29C-201ENST00000385231 88 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 MIR208B-201ENST00000401172 77 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 MIR1261-201ENST00000408659 82 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 RN7SKP284-201ENST00000411002 343 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 RNA5SP450-201ENST00000411206 102 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 RNU6-373P-201ENST00000411247 98 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.77□□□□□ -2.13
PDLIM1O00151 AC012306.1-201ENST00000423267 114 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.77□□□□□ -2.13
PDLIM1O00151 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.77□□□□□ -2.13
PDLIM1O00151 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms