Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC068944.2-201ENST00000610373 403 ntBASIC1.82□□□□□ -2.12
DDX39AO00148 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.82□□□□□ -2.12
DDX39AO00148 SNORA43.4-201ENST00000629559 138 ntBASIC1.82□□□□□ -2.12
DDX39AO00148 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
DDX39AO00148 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
DDX39AO00148 Y_RNA.77-201ENST00000362962 107 ntBASIC1.81□□□□□ -2.12
DDX39AO00148 RNU6-1026P-201ENST00000384465 108 ntBASIC1.81□□□□□ -2.12
DDX39AO00148 AL603825.1-201ENST00000438481 80 ntBASIC1.81□□□□□ -2.12
DDX39AO00148 RN7SKP210-201ENST00000459176 261 ntBASIC1.81□□□□□ -2.12
DDX39AO00148 RNU7-14P-201ENST00000459331 62 ntBASIC1.81□□□□□ -2.12
DDX39AO00148 AC007547.1-201ENST00000462177 490 ntBASIC1.81□□□□□ -2.12
DDX39AO00148 AC010486.3-201ENST00000511602 785 ntBASIC1.81□□□□□ -2.12
DDX39AO00148 SNORA31.17-201ENST00000516953 127 ntBASIC1.81□□□□□ -2.12
DDX39AO00148 SUMO2P18-201ENST00000518873 252 ntBASIC1.81□□□□□ -2.12
DDX39AO00148 ANP32BP3-201ENST00000559213 706 ntBASIC1.81□□□□□ -2.12
DDX39AO00148 AC090517.1-201ENST00000569307 266 ntBASIC1.81□□□□□ -2.12
DDX39AO00148 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.81□□□□□ -2.12
DDX39AO00148 AC087683.1-201ENST00000591187 441 ntBASIC1.81□□□□□ -2.12
DDX39AO00148 AC005520.5-201ENST00000613926 164 ntBASIC1.81□□□□□ -2.12
DDX39AO00148 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
DDX39AO00148 AC009541.1-201ENST00000438279 2662 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AP000568.1-201ENST00000282964 442 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 Y_RNA.381-201ENST00000365666 102 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 U8.10-201ENST00000384260 133 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 Y_RNA.553-201ENST00000384670 102 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 MIR1323-201ENST00000408090 73 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.8□□□□□ -2.12
DDX39AO00148 AL353193.1-201ENST00000421444 268 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AC012306.1-201ENST00000423267 114 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AL606489.2-201ENST00000433886 234 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.8□□□□□ -2.12
DDX39AO00148 MTND1P26-201ENST00000440488 538 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.8□□□□□ -2.12
DDX39AO00148 PPP1R2P5-201ENST00000457256 603 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.8□□□□□ -2.12
DDX39AO00148 TOMM22P6-201ENST00000465035 409 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AC010409.1-201ENST00000487382 476 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AC021146.2-201ENST00000504736 556 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AC010424.1-201ENST00000506336 297 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AC108078.1-201ENST00000508073 725 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 RNU6-189P-201ENST00000516120 101 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 RNU6-1098P-201ENST00000516772 96 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.8□□□□□ -2.12
DDX39AO00148 SUB1P4-201ENST00000566062 339 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 MIR4255-201ENST00000579351 72 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.8□□□□□ -2.12
DDX39AO00148 MIR4424-201ENST00000585257 86 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AC119751.7-201ENST00000600494 245 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AL645939.4-201ENST00000604495 135 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.8□□□□□ -2.12
DDX39AO00148 AC009994.1-201ENST00000606889 253 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AC064807.4-201ENST00000607201 407 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AC022513.1-201ENST00000624512 117 ntBASIC1.8□□□□□ -2.12
DDX39AO00148 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.8□□□□□ -2.12
DDX39AO00148 MIR424-201ENST00000362227 98 ntBASIC1.79□□□□□ -2.12
DDX39AO00148 SNORD31B-201ENST00000364977 69 ntBASIC1.79□□□□□ -2.12
DDX39AO00148 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
DDX39AO00148 RNU4-62P-201ENST00000410125 130 ntBASIC1.79□□□□□ -2.12
DDX39AO00148 RNU4-55P-201ENST00000410731 137 ntBASIC1.79□□□□□ -2.12
DDX39AO00148 HMGB1P18-201ENST00000438801 619 ntBASIC1.79□□□□□ -2.12
DDX39AO00148 MTCO1P19-201ENST00000443487 500 ntBASIC1.79□□□□□ -2.12
DDX39AO00148 RNU6-1037P-201ENST00000459571 107 ntBASIC1.79□□□□□ -2.12
DDX39AO00148 AC097473.1-201ENST00000508142 408 ntBASIC1.79□□□□□ -2.12
DDX39AO00148 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.79□□□□□ -2.12
DDX39AO00148 SNORA40.12-201ENST00000516329 111 ntBASIC1.79□□□□□ -2.12
DDX39AO00148 RNU6-612P-201ENST00000516909 102 ntBASIC1.79□□□□□ -2.12
DDX39AO00148 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.79□□□□□ -2.12
DDX39AO00148 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.79□□□□□ -2.12
DDX39AO00148 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.79□□□□□ -2.12
DDX39AO00148 MIR4285-201ENST00000581001 85 ntBASIC1.79□□□□□ -2.12
DDX39AO00148 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.79□□□□□ -2.12
DDX39AO00148 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.79□□□□□ -2.12
DDX39AO00148 MTND5P9-201ENST00000503854 1755 ntBASIC1.78□□□□□ -2.12
DDX39AO00148 MIR340-201ENST00000362125 95 ntBASIC1.78□□□□□ -2.12
DDX39AO00148 RNU1-76P-201ENST00000362903 159 ntBASIC1.78□□□□□ -2.12
DDX39AO00148 RNU1-42P-201ENST00000364033 160 ntBASIC1.78□□□□□ -2.12
DDX39AO00148 MTCO3P46-201ENST00000425787 232 ntBASIC1.78□□□□□ -2.12
DDX39AO00148 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.78□□□□□ -2.12
DDX39AO00148 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.78□□□□□ -2.12
DDX39AO00148 AC016925.1-201ENST00000458303 298 ntBASIC1.78□□□□□ -2.12
DDX39AO00148 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.78□□□□□ -2.12
DDX39AO00148 FAM206BP-201ENST00000510179 541 ntBASIC1.78□□□□□ -2.12
DDX39AO00148 AC015720.1-201ENST00000565251 277 ntBASIC1.78□□□□□ -2.12
DDX39AO00148 AC006362.1-201ENST00000567392 174 ntBASIC1.78□□□□□ -2.12
DDX39AO00148 MIR5094-201ENST00000578766 85 ntBASIC1.78□□□□□ -2.12
DDX39AO00148 AC016925.2-201ENST00000605108 242 ntBASIC1.78□□□□□ -2.12
DDX39AO00148 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.78□□□□□ -2.12
DDX39AO00148 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.78□□□□□ -2.12
DDX39AO00148 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.78□□□□□ -2.12
DDX39AO00148 AC090582.1-201ENST00000636321 199 ntBASIC1.78□□□□□ -2.12
DDX39AO00148 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.77□□□□□ -2.13
DDX39AO00148 RNU6-82P-201ENST00000363970 107 ntBASIC1.77□□□□□ -2.13
DDX39AO00148 RNU6-439P-201ENST00000384188 106 ntBASIC1.77□□□□□ -2.13
DDX39AO00148 Y_RNA.582-201ENST00000391023 95 ntBASIC1.77□□□□□ -2.13
DDX39AO00148 SNORA12.2-201ENST00000391040 156 ntBASIC1.77□□□□□ -2.13
DDX39AO00148 AF228730.1-201ENST00000397972 663 ntBASIC1.77□□□□□ -2.13
DDX39AO00148 CDK8P2-201ENST00000415020 547 ntBASIC1.77□□□□□ -2.13
DDX39AO00148 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
DDX39AO00148 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.77□□□□□ -2.13
DDX39AO00148 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms