Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-377P-201ENST00000515965 102 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC109479.2-201ENST00000517842 174 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 CBX3P7-201ENST00000532876 502 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC069294.1-201ENST00000608397 350 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC002553.4-201ENST00000616896 331 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC090617.10-201ENST00000624308 134 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL450472.1-202ENST00000637286 180 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 MTND4P5-201ENST00000435821 1374 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 SNORD114-19-201ENST00000363072 75 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 Y_RNA.295-201ENST00000364918 102 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-1329P-201ENST00000365664 107 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 EIF4E2P1-201ENST00000393781 255 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-321P-201ENST00000410912 106 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-293P-201ENST00000411259 106 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 ARL5AP1-201ENST00000418991 388 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL513185.2-201ENST00000425543 193 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 MTCO2P3-201ENST00000442543 421 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL353752.1-201ENST00000454946 260 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 RPS29P27-201ENST00000463711 170 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 RPL30P12-201ENST00000474666 353 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL121594.1-201ENST00000475906 575 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 RPL39P5-202ENST00000512505 151 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 TRMT112P2-201ENST00000512910 132 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 Y_RNA.673-201ENST00000516306 88 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 MTND4LP26-201ENST00000518144 282 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 MIR4529-201ENST00000578110 78 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 MIR4287-201ENST00000579398 78 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 BNIP3P16-201ENST00000589779 534 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 AP000907.4-201ENST00000604143 237 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 ELOCP5-201ENST00000604924 333 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TMX2-CTNND1H3BSU7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL356432.1-201ENST00000405809 419 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 MIR1277-201ENST00000408536 78 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU2-48P-201ENST00000410694 191 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 RPL30P16-201ENST00000419341 429 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 RPL23AP95-201ENST00000426806 265 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL365400.1-201ENST00000431854 640 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL441985.1-201ENST00000457727 251 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC140059.1-201ENST00000489238 361 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC018868.1-201ENST00000491307 315 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC079140.5-201ENST00000507882 310 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 AF213884.2-201ENST00000510417 903 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC091874.1-201ENST00000511402 339 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 SNORA31.25-201ENST00000517242 134 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 MIR3672-201ENST00000584290 82 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC096772.1-201ENST00000609146 564 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC092794.1-201ENST00000612734 582 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 uc_338.15-201ENST00000615470 191 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC006026.1-201ENST00000444025 1803 ntBASIC1.61□□□□□ -2.15
TMX2-CTNND1H3BSU7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC027514.1-201ENST00000588561 1603 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 Y_RNA.135-201ENST00000363439 95 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 Y_RNA.373-201ENST00000365600 103 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-1032P-201ENST00000384100 107 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 Y_RNA.453-201ENST00000384223 109 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-43P-201ENST00000384302 107 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 MIR544A-201ENST00000384855 91 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 MIR676-201ENST00000390702 67 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 CBX3P9-201ENST00000402326 552 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL591034.2-201ENST00000402839 359 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL358453.1-201ENST00000422522 250 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 RPL39P29-201ENST00000447779 157 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL031274.1-201ENST00000450334 232 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC006026.2-201ENST00000457376 180 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 PMCHL2-203ENST00000457791 237 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 RPL30P1-201ENST00000488676 339 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 RPL22P13-201ENST00000493291 347 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 SNORA19.2-201ENST00000516013 114 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU5F-2P-201ENST00000516066 82 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU2-53P-201ENST00000516257 147 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC069113.1-201ENST00000517763 267 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms