Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
H3BM21 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
H3BM21 RNU6-173P-201ENST00000364215 104 ntBASIC4.27□□□□□ -1.73
H3BM21 MIR624-201ENST00000385217 97 ntBASIC4.27□□□□□ -1.73
H3BM21 MIR208B-201ENST00000401172 77 ntBASIC4.27□□□□□ -1.73
H3BM21 RNA5SP127-201ENST00000411051 133 ntBASIC4.27□□□□□ -1.73
H3BM21 SNRPEP9-201ENST00000436794 238 ntBASIC4.27□□□□□ -1.73
H3BM21 AL500522.2-201ENST00000448562 343 ntBASIC4.27□□□□□ -1.73
H3BM21 S100A11P1-201ENST00000477525 312 ntBASIC4.27□□□□□ -1.73
H3BM21 RPS29P2-201ENST00000479278 136 ntBASIC4.27□□□□□ -1.73
H3BM21 AC078817.1-201ENST00000492623 435 ntBASIC4.27□□□□□ -1.73
H3BM21 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.27□□□□□ -1.73
H3BM21 TRAV8-5-201ENST00000537369 341 ntBASIC4.27□□□□□ -1.73
H3BM21 AP003357.1-201ENST00000604497 148 ntBASIC4.27□□□□□ -1.73
H3BM21 AL021997.2-201ENST00000615674 271 ntBASIC4.27□□□□□ -1.73
H3BM21 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
H3BM21 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3BM21 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3BM21 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
H3BM21 RNU6-776P-201ENST00000364403 104 ntBASIC4.26□□□□□ -1.73
H3BM21 RNU4-41P-201ENST00000364426 143 ntBASIC4.26□□□□□ -1.73
H3BM21 RNU6-1022P-201ENST00000365049 104 ntBASIC4.26□□□□□ -1.73
H3BM21 DYNLT3P1-201ENST00000378574 347 ntBASIC4.26□□□□□ -1.73
H3BM21 MIR23B-201ENST00000384832 97 ntBASIC4.26□□□□□ -1.73
H3BM21 RNA5SP317-201ENST00000410176 116 ntBASIC4.26□□□□□ -1.73
H3BM21 RN7SKP167-201ENST00000411047 285 ntBASIC4.26□□□□□ -1.73
H3BM21 RNA5SP311-201ENST00000411290 116 ntBASIC4.26□□□□□ -1.73
H3BM21 AC069285.2-201ENST00000440210 275 ntBASIC4.26□□□□□ -1.73
H3BM21 RNU6-437P-201ENST00000459408 95 ntBASIC4.26□□□□□ -1.73
H3BM21 RNA5SP315-201ENST00000516340 116 ntBASIC4.26□□□□□ -1.73
H3BM21 RNA5SP312-201ENST00000517068 116 ntBASIC4.26□□□□□ -1.73
H3BM21 CR383656.8-201ENST00000549046 145 ntBASIC4.26□□□□□ -1.73
H3BM21 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.26□□□□□ -1.73
H3BM21 AL162713.1-201ENST00000604480 262 ntBASIC4.26□□□□□ -1.73
H3BM21 SNORD11B-201ENST00000607707 90 ntBASIC4.26□□□□□ -1.73
H3BM21 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.26□□□□□ -1.73
H3BM21 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.26□□□□□ -1.73
H3BM21 MIR3529-201ENST00000637713 78 ntBASIC4.26□□□□□ -1.73
H3BM21 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3BM21 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3BM21 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H3BM21 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
H3BM21 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3BM21 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.26□□□□□ -1.73
H3BM21 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
H3BM21 AL672296.1-201ENST00000427780 2158 ntBASIC4.26□□□□□ -1.73
H3BM21 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.26□□□□□ -1.73
H3BM21 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
H3BM21 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
H3BM21 AL133412.1-201ENST00000380194 2992 ntBASIC4.25□□□□□ -1.73
H3BM21 SPRR2C-201ENST00000290702 219 ntBASIC4.25□□□□□ -1.73
H3BM21 Y_RNA.111-201ENST00000363248 100 ntBASIC4.25□□□□□ -1.73
H3BM21 Y_RNA.634-201ENST00000364811 113 ntBASIC4.25□□□□□ -1.73
H3BM21 RNU1-13P-201ENST00000384499 162 ntBASIC4.25□□□□□ -1.73
H3BM21 MIR3074-201ENST00000384885 81 ntBASIC4.25□□□□□ -1.73
H3BM21 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
H3BM21 RPL21P3-201ENST00000395517 478 ntBASIC4.25□□□□□ -1.73
H3BM21 MIR1911-201ENST00000410783 80 ntBASIC4.25□□□□□ -1.73
H3BM21 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.25□□□□□ -1.73
H3BM21 MARK2P15-201ENST00000432204 2186 ntBASIC4.25□□□□□ -1.73
H3BM21 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.25□□□□□ -1.73
H3BM21 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.25□□□□□ -1.73
H3BM21 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
H3BM21 AC090525.1-201ENST00000479116 478 ntBASIC4.25□□□□□ -1.73
H3BM21 RPL21P129-201ENST00000491732 478 ntBASIC4.25□□□□□ -1.73
H3BM21 RNA5SP49-201ENST00000516450 115 ntBASIC4.25□□□□□ -1.73
H3BM21 RNU6-1018P-201ENST00000516577 106 ntBASIC4.25□□□□□ -1.73
H3BM21 RNU6-703P-201ENST00000516946 107 ntBASIC4.25□□□□□ -1.73
H3BM21 SNORA31.23-201ENST00000517219 133 ntBASIC4.25□□□□□ -1.73
H3BM21 AC025281.1-201ENST00000567026 265 ntBASIC4.25□□□□□ -1.73
H3BM21 AC097639.2-201ENST00000603159 172 ntBASIC4.25□□□□□ -1.73
H3BM21 RNA5SP108-201ENST00000605921 117 ntBASIC4.25□□□□□ -1.73
H3BM21 FAM27D1-201ENST00000612308 341 ntBASIC4.25□□□□□ -1.73
H3BM21 AL137067.1-201ENST00000615933 120 ntBASIC4.25□□□□□ -1.73
H3BM21 AC068205.3-201ENST00000636385 468 ntBASIC4.25□□□□□ -1.73
H3BM21 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.25□□□□□ -1.73
H3BM21 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
H3BM21 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
H3BM21 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
H3BM21 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
H3BM21 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.25□□□□□ -1.73
H3BM21 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
H3BM21 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.24□□□□□ -1.73
H3BM21 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
H3BM21 RNU1-14P-201ENST00000362759 152 ntBASIC4.24□□□□□ -1.73
H3BM21 Y_RNA.313-201ENST00000365095 103 ntBASIC4.24□□□□□ -1.73
H3BM21 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
H3BM21 U3.26-201ENST00000391236 204 ntBASIC4.24□□□□□ -1.73
H3BM21 RN7SL604P-201ENST00000492589 296 ntBASIC4.24□□□□□ -1.73
H3BM21 RN7SL691P-201ENST00000494487 301 ntBASIC4.24□□□□□ -1.73
H3BM21 RPL23AP54-201ENST00000495129 419 ntBASIC4.24□□□□□ -1.73
H3BM21 SNORA31.8-201ENST00000516327 108 ntBASIC4.24□□□□□ -1.73
H3BM21 AC007229.1-201ENST00000590455 412 ntBASIC4.24□□□□□ -1.73
H3BM21 AC112484.5-201ENST00000624189 228 ntBASIC4.24□□□□□ -1.73
H3BM21 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.24□□□□□ -1.73
H3BM21 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.24□□□□□ -1.73
H3BM21 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.23□□□□□ -1.73
H3BM21 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
H3BM21 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.23□□□□□ -1.73
H3BM21 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms