Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MIR6755-201ENST00000619993 66 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 AC112204.3-201ENST00000623822 332 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 MIR194-1-201ENST00000384892 85 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.45□□□□□ -2.48
COL6A5A8TX70 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC-0.45□□□□□ -2.48
COL6A5A8TX70 AL500527.2-201ENST00000454105 95 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 RPL31P53-201ENST00000457065 348 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 AC093809.1-201ENST00000509155 340 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 SNORA31.10-201ENST00000516482 106 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 RNA5SP33-201ENST00000516687 98 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC-0.45□□□□□ -2.48
COL6A5A8TX70 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.45□□□□□ -2.48
COL6A5A8TX70 AL158050.2-201ENST00000605336 568 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 AC012213.4-201ENST00000606457 354 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 AC009268.2-201ENST00000621925 457 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 RNU4-79P-201ENST00000362764 141 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 SNORD115-42-201ENST00000364273 82 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-0.45□□□□□ -2.48
COL6A5A8TX70 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.45□□□□□ -2.48
COL6A5A8TX70 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.45□□□□□ -2.48
COL6A5A8TX70 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.45□□□□□ -2.48
COL6A5A8TX70 AP002906.1-201ENST00000603405 233 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 AC006441.5-201ENST00000612680 209 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 AC130324.3-201ENST00000614165 542 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.45□□□□□ -2.48
COL6A5A8TX70 RNU4-36P-201ENST00000364294 144 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 RNU6-898P-201ENST00000365627 104 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 MIR1298-201ENST00000408783 112 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 RNA5SP95-201ENST00000410319 137 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 Z82210.1-201ENST00000440037 231 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC-0.46□□□□□ -2.48
COL6A5A8TX70 AC012213.3-201ENST00000577199 777 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 BNIP3P23-201ENST00000599655 511 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.46□□□□□ -2.48
COL6A5A8TX70 RNU6-819P-201ENST00000364116 107 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 SNORA48.1-201ENST00000390879 135 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 RPL22P22-201ENST00000395439 379 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 MIR892B-201ENST00000401279 77 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.46□□□□□ -2.48
COL6A5A8TX70 MTCO2P25-201ENST00000447065 681 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 AC007215.1-201ENST00000464893 276 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 SNORA25.12-201ENST00000516202 82 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.46□□□□□ -2.48
COL6A5A8TX70 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.46□□□□□ -2.48
COL6A5A8TX70 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-0.46□□□□□ -2.48
COL6A5A8TX70 AC015688.6-201ENST00000577737 104 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 AC006213.4-201ENST00000616184 634 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 MTND5P18-201ENST00000445624 1801 ntBASIC-0.46□□□□□ -2.48
COL6A5A8TX70 RNU6-374P-201ENST00000364146 108 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 RNU6-611P-201ENST00000384276 104 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 RNU6-269P-201ENST00000391077 97 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 MIR1302-8-201ENST00000408342 128 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 CALM2P2-201ENST00000428512 440 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 AL096829.2-201ENST00000446582 742 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-0.47□□□□□ -2.48
COL6A5A8TX70 RNU6-1256P-201ENST00000516539 103 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.47□□□□□ -2.48
COL6A5A8TX70 ROCK1P1-201ENST00000573767 549 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 MIR4520-1-201ENST00000582609 70 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.47□□□□□ -2.48
COL6A5A8TX70 AC005021.1-201ENST00000608730 355 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 AC007490.1-201ENST00000624321 703 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 AL133396.1-201ENST00000432048 687 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 AC002429.1-201ENST00000437672 148 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 AC092427.1-201ENST00000439177 601 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 AC005094.1-201ENST00000440420 368 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 RAC1P7-201ENST00000445367 377 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 SCARNA18B-201ENST00000458806 135 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 AC022868.1-201ENST00000517767 391 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 AC022616.3-201ENST00000523940 148 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.47□□□□□ -2.48
COL6A5A8TX70 MIR548AD-201ENST00000584780 82 ntBASIC-0.47□□□□□ -2.48
COL6A5A8TX70 AC092268.1-201ENST00000342691 405 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.48□□□□□ -2.49
COL6A5A8TX70 RPL30P1-201ENST00000488676 339 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 AC022861.1-201ENST00000522981 663 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 MTND5P31-201ENST00000419366 1374 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.48□□□□□ -2.49
COL6A5A8TX70 SNORA75.6-201ENST00000391318 127 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 MIR548H2-201ENST00000408874 88 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 MTCO1P21-201ENST00000416634 589 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.48□□□□□ -2.49
COL6A5A8TX70 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.48□□□□□ -2.49
COL6A5A8TX70 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.48□□□□□ -2.49
COL6A5A8TX70 AL441985.1-201ENST00000457727 251 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.48□□□□□ -2.49
COL6A5A8TX70 AC107304.1-201ENST00000604229 296 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 UBE2Q2P6-201ENST00000612666 153 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms