Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC064836.2-201ENST00000609491 462 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 AL161423.1-201ENST00000613700 262 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 AC092608.2-201ENST00000624427 218 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.98□□□□□ -2.09
SRRM4A7MD48 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SRRM4A7MD48 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.98□□□□□ -2.09
SRRM4A7MD48 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SRRM4A7MD48 AC233981.2-201ENST00000611524 1614 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SRRM4A7MD48 AC062016.1-201ENST00000355719 319 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 MIR21-201ENST00000362134 72 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 Y_RNA.138-201ENST00000363462 102 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 Y_RNA.504-201ENST00000384481 104 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SRRM4A7MD48 MTCYBP2-201ENST00000407745 171 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 MIR1302-11-201ENST00000408051 138 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 MIR1302-9-201ENST00000408365 138 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 MIR1302-10-201ENST00000408734 138 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 EDDM3CP-201ENST00000415977 425 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 MTCO2P12-201ENST00000427426 682 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.97□□□□□ -2.09
SRRM4A7MD48 AC130509.1-201ENST00000464158 433 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 AC068781.1-201ENST00000488231 618 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 Y_RNA.718-201ENST00000517110 102 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.97□□□□□ -2.09
SRRM4A7MD48 APOOP3-201ENST00000536787 586 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.97□□□□□ -2.09
SRRM4A7MD48 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.97□□□□□ -2.09
SRRM4A7MD48 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.97□□□□□ -2.09
SRRM4A7MD48 AC009127.3-201ENST00000570531 403 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.97□□□□□ -2.09
SRRM4A7MD48 MIR1302-2-201ENST00000607096 138 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 MIR8076-201ENST00000611401 83 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 AL137847.3-201ENST00000611521 109 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 AC126177.8-201ENST00000618339 1015 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 AC137590.2-201ENST00000619709 240 ntBASIC1.97□□□□□ -2.09
SRRM4A7MD48 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
SRRM4A7MD48 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
SRRM4A7MD48 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.97□□□□□ -2.09
SRRM4A7MD48 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SRRM4A7MD48 AC007336.1-201ENST00000576365 3828 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SRRM4A7MD48 RNU1-23P-201ENST00000363361 144 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 RNU1-138P-201ENST00000384093 164 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 RNU6-601P-201ENST00000384540 107 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 SNORA41-201ENST00000384675 132 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 MIR518C-201ENST00000384822 101 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 MIR29C-201ENST00000385231 88 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 Y_RNA.579-201ENST00000390939 94 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 RNY4P36-201ENST00000391116 96 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 Y_RNA.597-201ENST00000410463 100 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 SRIP3-201ENST00000413200 219 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 MTCO2P27-201ENST00000420740 428 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.96□□□□□ -2.1
SRRM4A7MD48 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.96□□□□□ -2.1
SRRM4A7MD48 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.96□□□□□ -2.1
SRRM4A7MD48 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.96□□□□□ -2.1
SRRM4A7MD48 AL118496.2-201ENST00000448300 230 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 AL109933.2-201ENST00000452651 260 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.96□□□□□ -2.1
SRRM4A7MD48 RNA5SP356-201ENST00000515972 94 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 CPDP1-201ENST00000579660 283 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 AC078795.3-201ENST00000602913 472 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 AC084781.2-201ENST00000615568 161 ntBASIC1.96□□□□□ -2.1
SRRM4A7MD48 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SRRM4A7MD48 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SRRM4A7MD48 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
SRRM4A7MD48 U3.9-201ENST00000363823 204 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 RNA5SP68-201ENST00000363885 119 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 RNU6-1317P-201ENST00000364582 104 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 RNU6-1227P-201ENST00000383981 107 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 RNU6-95P-201ENST00000384697 107 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 MIR196B-201ENST00000384852 84 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 AL591034.2-201ENST00000402839 359 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.95□□□□□ -2.1
SRRM4A7MD48 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.95□□□□□ -2.1
SRRM4A7MD48 DAP3P1-201ENST00000441522 278 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 AL137159.1-201ENST00000452808 512 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.95□□□□□ -2.1
SRRM4A7MD48 AC145146.1-201ENST00000496370 254 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 AC005741.1-201ENST00000511094 432 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 SNORA31.15-201ENST00000516771 132 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 RNU6-667P-201ENST00000517186 102 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.95□□□□□ -2.1
SRRM4A7MD48 AC124303.1-201ENST00000605703 360 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 SNORD14A-201ENST00000606526 91 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 AL133215.3-201ENST00000609801 448 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 AC005520.5-201ENST00000613926 164 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 MIR6128-201ENST00000615528 109 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 U4.3-201ENST00000621047 82 ntBASIC1.95□□□□□ -2.1
SRRM4A7MD48 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SRRM4A7MD48 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
SRRM4A7MD48 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SRRM4A7MD48 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SRRM4A7MD48 MIR369-201ENST00000362155 70 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 RNU4-15P-201ENST00000362613 141 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 Y_RNA.132-201ENST00000363421 102 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 RNU6-1188P-201ENST00000363795 107 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 Y_RNA.315-201ENST00000365117 102 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms