Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RNU1-139P-201ENST00000391307 165 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 RN7SKP58-201ENST00000411010 305 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 AC012306.1-201ENST00000423267 114 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 AL139132.1-201ENST00000431587 344 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 AC244505.4-201ENST00000434905 287 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 SSXP5-201ENST00000443473 287 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 AP001324.2-201ENST00000461163 319 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 UBE2DNL-203ENST00000474922 222 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 RPS27P26-201ENST00000494583 239 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 AIG1P1-201ENST00000503376 148 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 SNORA25.11-201ENST00000515935 105 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 AC090517.1-201ENST00000569307 266 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 MIR3671-201ENST00000580455 88 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 MIR3136-201ENST00000583498 78 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 RAC1P9-201ENST00000604990 392 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 AL121655.1-201ENST00000605811 308 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PTPDC1A2A3K4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 RNU6-212P-201ENST00000362642 104 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 Y_RNA.401-201ENST00000383965 117 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 Y_RNA.556-201ENST00000384677 113 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 RPS26P42-201ENST00000413485 326 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 snoU13.14-201ENST00000459372 104 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 AP000870.1-201ENST00000472927 406 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 AC090525.1-201ENST00000479116 478 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 RNU6-1114P-201ENST00000516022 107 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 SNORA31.16-201ENST00000516773 139 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 RNU6-1198P-201ENST00000516904 67 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 AC022868.1-201ENST00000517767 391 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 AC027288.2-201ENST00000553028 243 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 AL078605.1-201ENST00000603529 500 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 AL138963.2-201ENST00000605137 226 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 SNORD98-201ENST00000636377 67 ntBASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTPDC1A2A3K4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.4□□□□□ -1.86
PTPDC1A2A3K4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PTPDC1A2A3K4 RNU6-529P-201ENST00000363383 104 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 RNU6-799P-201ENST00000363567 107 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 SNORD115-8-201ENST00000363856 82 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 Y_RNA.193-201ENST00000363979 102 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 Y_RNA.214-201ENST00000364201 112 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 RNU6-702P-201ENST00000364982 107 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 SNORD115-38-201ENST00000365037 82 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 Y_RNA.319-201ENST00000365138 92 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 AL451074.5-201ENST00000415894 435 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 AL358075.3-201ENST00000426289 226 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 SDAD1P3-201ENST00000427380 333 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 EIF1P2-201ENST00000428233 350 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 RPEP5-201ENST00000441137 268 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 AL731563.1-201ENST00000442202 214 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 DYNLT3P2-201ENST00000442517 295 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 snoU13.6-201ENST00000458785 104 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 AC083906.5-201ENST00000503722 328 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 RNU5F-2P-201ENST00000516066 82 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 SNORA40.15-201ENST00000516884 107 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 RNU6-897P-201ENST00000517135 105 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 HSPE1P20-201ENST00000538133 289 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.4□□□□□ -1.87
PTPDC1A2A3K4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 RNU6-1301P-201ENST00000362724 104 ntBASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 RNU4-56P-201ENST00000364700 142 ntBASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 RNU6-611P-201ENST00000384276 104 ntBASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 ELOCP20-201ENST00000422460 345 ntBASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 RPS29P6-201ENST00000438196 145 ntBASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 AC009969.1-201ENST00000438726 172 ntBASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 AP000705.1-201ENST00000454567 350 ntBASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 AC010469.2-201ENST00000496412 480 ntBASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 RPL23AP94-201ENST00000512518 302 ntBASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 RNU6-1143P-201ENST00000516125 104 ntBASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 RNU6-397P-201ENST00000516226 104 ntBASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 MYL12BP1-201ENST00000569826 507 ntBASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 MIR4298-201ENST00000584380 73 ntBASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 U6.92-201ENST00000636464 89 ntBASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms