Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RN7SKP57-201ENST00000517248 293 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 COX6CP5-201ENST00000527162 228 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC105245.1-201ENST00000581934 244 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 PRR13P7-201ENST00000605538 430 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 AL121655.1-201ENST00000605811 308 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC011476.5-201ENST00000615594 130 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC018692.3-201ENST00000623929 123 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 MIR7157-201ENST00000635801 60 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 BX322639.1-202ENST00000423987 2213 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 SET-203ENST00000372688 801 ntTSL 2 BASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AP002088.1-201ENST00000382740 395 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 SNORA9-201ENST00000384215 133 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6-196P-201ENST00000384315 107 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 SNORD12B-201ENST00000410433 91 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 ELOCP20-201ENST00000422460 345 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC027124.2-201ENST00000428249 105 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 CST9LP2-201ENST00000437612 320 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC010095.1-201ENST00000443543 144 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC090515.1-201ENST00000465295 476 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC067942.3-201ENST00000512025 362 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 SNORA74D-201ENST00000516404 141 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6-1012P-201ENST00000516606 109 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 SNORA40.15-201ENST00000516884 107 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6-897P-201ENST00000517135 105 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 MIR4659A-201ENST00000580269 81 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AL713866.2-201ENST00000603579 219 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC069294.1-201ENST00000608397 350 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 7SK.10-201ENST00000621414 298 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC091953.5-201ENST00000622919 233 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC073476.4-201ENST00000628409 72 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 SNORA50A-202ENST00000629536 136 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC000403.1-201ENST00000613696 3585 ntBASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.34□□□□□ -2.03
IGHV4-28A0A0C4DH34 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
IGHV4-28A0A0C4DH34 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.34□□□□□ -2.04
IGHV4-28A0A0C4DH34 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.04
IGHV4-28A0A0C4DH34 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNA5SP383-201ENST00000362934 120 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.214-201ENST00000364201 112 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNU6-463P-201ENST00000384340 107 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNU6-1274P-201ENST00000384557 107 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 MIR329-1-201ENST00000385028 80 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 RPL21P1-201ENST00000399532 476 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.597-201ENST00000410463 100 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 DYNLT3P2-201ENST00000442517 295 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 FCF1P4-201ENST00000448326 183 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 RN7SL863P-201ENST00000462370 296 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC109925.1-201ENST00000478069 331 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC023141.11-201ENST00000508864 202 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNY3P15-201ENST00000516297 97 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 MIR2276-201ENST00000516886 89 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 NDUFB9P3-201ENST00000521269 501 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 AP002404.1-201ENST00000532005 451 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC023824.2-201ENST00000566185 400 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 MIR3200-201ENST00000580767 85 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC023043.3-201ENST00000593113 385 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 AL356575.1-201ENST00000603008 283 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 SNRPGP20-201ENST00000604477 205 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 YPEL5P2-201ENST00000605553 359 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC010999.1-201ENST00000611856 324 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC240442.1-201ENST00000616055 283 ntBASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.33□□□□□ -2.04
IGHV4-28A0A0C4DH34 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.26-201ENST00000362539 101 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNU6-806P-201ENST00000365147 105 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 SNORA18.2-201ENST00000383865 132 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNU6-245P-201ENST00000384020 107 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 MIR29B2-201ENST00000385055 81 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 MIR320B2-201ENST00000408479 138 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 U6atac.2-201ENST00000408644 118 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNA5SP293-201ENST00000410527 113 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms