Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RNU6-888P-201ENST00000363010 101 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 SNORA7.2-201ENST00000364446 145 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 SNORA62-201ENST00000365493 153 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 SNORA2.3-201ENST00000383920 135 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 SNORD61-201ENST00000384252 73 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 MIR1283-1-201ENST00000408494 87 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 AC069285.2-201ENST00000440210 275 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 RPS4XP11-201ENST00000446897 772 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 RN7SL443P-201ENST00000464331 290 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 AC084357.1-201ENST00000473404 255 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 S100A11P1-201ENST00000477525 312 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 AC140172.1-201ENST00000502928 141 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 COX6B1P5-201ENST00000509843 249 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 RNU6-1098P-201ENST00000516772 96 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 SNORD19.2-201ENST00000516978 73 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 RNU6-1270P-201ENST00000517128 108 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 MIR4753-201ENST00000585119 83 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 U6.73-201ENST00000619194 103 ntBASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 AC007656.2-201ENST00000624902 4547 ntBASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 RNA5SP505-201ENST00000364748 108 ntBASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 SNORD24-201ENST00000383884 75 ntBASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 MIR3074-201ENST00000384885 81 ntBASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 RPS16P5-201ENST00000406501 404 ntBASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 RN7SKP267-201ENST00000410381 285 ntBASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 COX6CP13-201ENST00000428703 226 ntBASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 BX323845.1-201ENST00000432417 179 ntBASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 RN7SL354P-201ENST00000469282 294 ntBASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 RN7SKP209-201ENST00000516888 304 ntBASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 MIR7703-201ENST00000620784 77 ntBASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA4Q9Y5G9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 RNU6-486P-201ENST00000363116 107 ntBASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 RNU6-24P-201ENST00000384440 107 ntBASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 SNORD77.3-201ENST00000391113 65 ntBASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 AC073264.2-201ENST00000448886 166 ntBASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 RN7SL441P-201ENST00000492388 296 ntBASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 AC011604.1-201ENST00000545978 196 ntBASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 AC006349.1-201ENST00000555526 235 ntBASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 MIR4662A-201ENST00000637499 67 ntBASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 MFSD8-216ENST00000641147 4009 ntBASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.86□□□□□ -1.63
PCDHGA4Q9Y5G9 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 SDAD1P1-202ENST00000524156 2051 ntBASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 RNU6-690P-201ENST00000365242 106 ntBASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 U3.32-201ENST00000408116 212 ntBASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 MIR1912-201ENST00000410389 80 ntBASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 Y_RNA.601-201ENST00000410500 113 ntBASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 RNU6-57P-201ENST00000411348 103 ntBASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 AC097462.1-201ENST00000514125 324 ntBASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 AC091979.2-201ENST00000607514 214 ntBASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 MIR6780A-201ENST00000615089 68 ntBASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 AC073308.1-201ENST00000623696 305 ntBASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA4Q9Y5G9 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 RNA5SP428-201ENST00000365129 132 ntBASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 SNORA77-201ENST00000408716 125 ntBASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 RN7SKP16-201ENST00000410180 299 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms