Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PCGEM1.1-201ENST00000613431 131 ntBASIC3.12□□□□□ -1.91
PCDHGA6Q9Y5G7 AC040896.1-201ENST00000613819 479 ntBASIC3.12□□□□□ -1.91
PCDHGA6Q9Y5G7 RNU1-68P-201ENST00000615382 146 ntBASIC3.12□□□□□ -1.91
PCDHGA6Q9Y5G7 U1.39-201ENST00000621562 146 ntBASIC3.12□□□□□ -1.91
PCDHGA6Q9Y5G7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGA6Q9Y5G7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 Y_RNA.216-201ENST00000364205 93 ntBASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 RNA5SP240-201ENST00000365355 128 ntBASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 MIR606-201ENST00000384851 96 ntBASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 RNU1-139P-201ENST00000391307 165 ntBASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 RNA5SP201-201ENST00000410316 124 ntBASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 HMGB3P2-201ENST00000411913 584 ntBASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 RPL30P4-201ENST00000429309 333 ntBASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 AC140059.1-201ENST00000489238 361 ntBASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 AC023141.11-201ENST00000508864 202 ntBASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 RNU6-1114P-201ENST00000516022 107 ntBASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 RNU6-58P-201ENST00000517143 103 ntBASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 AL132822.1-201ENST00000617063 513 ntBASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 AC080128.1-201ENST00000474389 1917 ntBASIC3.11□□□□□ -1.91
PCDHGA6Q9Y5G7 MTND5P16-201ENST00000460269 1703 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 RNU4-15P-201ENST00000362613 141 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 Y_RNA.132-201ENST00000363421 102 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 Y_RNA.145-201ENST00000363527 102 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 Y_RNA.358-201ENST00000365491 99 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 SNORD14.1-201ENST00000365609 90 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 RNU6-245P-201ENST00000384020 107 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 MIR218-1-201ENST00000384999 110 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 RNU6-1328P-201ENST00000410938 106 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 RPS15AP7-201ENST00000439294 405 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 EEF1B2P7-201ENST00000451177 676 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 snoU13.6-201ENST00000458785 104 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 RNU7-169P-201ENST00000459456 61 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 AL049873.1-201ENST00000480540 376 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 AC145146.1-201ENST00000496370 254 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 AC022616.4-201ENST00000522985 181 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 AC006600.1-201ENST00000572529 153 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 RPS29P30-201ENST00000600975 111 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 AC138305.3-201ENST00000624988 240 ntBASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHGA6Q9Y5G7 BX322639.1-202ENST00000423987 2213 ntBASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 RNU6-159P-201ENST00000391080 106 ntBASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 RNU6-101P-201ENST00000410323 104 ntBASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 AL353705.1-201ENST00000433468 480 ntBASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 AP000705.1-201ENST00000454567 350 ntBASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 AL353752.1-201ENST00000454946 260 ntBASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 AC112492.4-201ENST00000456549 352 ntBASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 CKS1BP2-201ENST00000497342 240 ntBASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 RNU6-1045P-201ENST00000516321 107 ntBASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 AC245166.1-201ENST00000521012 253 ntBASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 AC027288.2-201ENST00000553028 243 ntBASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 AL162274.2-201ENST00000614406 332 ntBASIC3.09□□□□□ -1.91
PCDHGA6Q9Y5G7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PCDHGA6Q9Y5G7 snoU2_19.1-201ENST00000362361 80 ntBASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 SNORA63.7-201ENST00000365579 123 ntBASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 Y_RNA.380-201ENST00000365663 111 ntBASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 Y_RNA.557-201ENST00000384680 107 ntBASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 RN7SKP220-201ENST00000410611 288 ntBASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 AC104332.2-201ENST00000429959 156 ntBASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 CBX3P6-201ENST00000430257 527 ntBASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 AC091179.1-201ENST00000461606 579 ntBASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 AP001486.1-201ENST00000463339 476 ntBASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 AC132942.1-201ENST00000486753 483 ntBASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 RNA5SP341-201ENST00000516261 117 ntBASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 RNU6-586P-201ENST00000517265 104 ntBASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 CYCSP23-201ENST00000519781 313 ntBASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 EIF4BP1-201ENST00000554881 351 ntBASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHGA6Q9Y5G7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.07□□□□□ -1.92
PCDHGA6Q9Y5G7 MIR422A-201ENST00000362286 90 ntBASIC3.07□□□□□ -1.92
PCDHGA6Q9Y5G7 RNU6-874P-201ENST00000362390 105 ntBASIC3.07□□□□□ -1.92
PCDHGA6Q9Y5G7 RNU6-378P-201ENST00000384324 107 ntBASIC3.07□□□□□ -1.92
PCDHGA6Q9Y5G7 RNU6-738P-201ENST00000384531 106 ntBASIC3.07□□□□□ -1.92
PCDHGA6Q9Y5G7 MIR627-201ENST00000384979 97 ntBASIC3.07□□□□□ -1.92
PCDHGA6Q9Y5G7 RNU2-63P-201ENST00000410792 194 ntBASIC3.07□□□□□ -1.92
PCDHGA6Q9Y5G7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDHGA6Q9Y5G7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHGA6Q9Y5G7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHGA6Q9Y5G7 AP000870.1-201ENST00000472927 406 ntBASIC3.07□□□□□ -1.92
PCDHGA6Q9Y5G7 RNU6-327P-201ENST00000516270 127 ntBASIC3.07□□□□□ -1.92
PCDHGA6Q9Y5G7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.07□□□□□ -1.92
PCDHGA6Q9Y5G7 AL442163.3-201ENST00000554110 156 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 275.8 ms