Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGC4Q9Y5F7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGC4Q9Y5F7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGC4Q9Y5F7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 RNU1-75P-201ENST00000347264 129 ntBASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 U8.7-201ENST00000364940 136 ntBASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 Y_RNA.361-201ENST00000365515 120 ntBASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 SNORA18.2-201ENST00000383865 132 ntBASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 RPL21P65-201ENST00000406094 466 ntBASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 Y_RNA.622-201ENST00000411091 108 ntBASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 Z75741.1-201ENST00000446793 314 ntBASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 AC025554.1-201ENST00000505641 188 ntBASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 AC120024.3-201ENST00000603167 156 ntBASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHGC4Q9Y5F7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHGC4Q9Y5F7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 ZNF962P-201ENST00000443465 3140 ntBASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 RNU6-529P-201ENST00000363383 104 ntBASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 RNU6-597P-201ENST00000365620 102 ntBASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 RNY3P5-201ENST00000384127 102 ntBASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 AL133475.1-201ENST00000404414 305 ntBASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 AL365496.1-201ENST00000426885 215 ntBASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 AC010469.1-201ENST00000463864 576 ntBASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 SNORA70.12-201ENST00000516084 153 ntBASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 SNORD33.1-201ENST00000516213 88 ntBASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 AC106785.1-201ENST00000565935 262 ntBASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 AC006133.1-201ENST00000617106 264 ntBASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 MIR3199-2-201ENST00000636243 86 ntBASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PCDHGC4Q9Y5F7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 RNU6-600P-201ENST00000362524 99 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 SNORD45.3-201ENST00000363836 72 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 RNA5SP283-201ENST00000365604 119 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 RNU6-1336P-201ENST00000383886 109 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 MIR134-201ENST00000385258 73 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 AL691449.1-201ENST00000426570 421 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 AL117339.2-201ENST00000430475 180 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 AL161651.1-201ENST00000440882 223 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 AL162151.2-201ENST00000448875 158 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 RPS29P2-201ENST00000479278 136 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 AC117454.1-201ENST00000491120 168 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 AC146944.2-203ENST00000502493 354 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 AC139495.1-202ENST00000513164 354 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 RNU2-44P-201ENST00000516795 194 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 AC010733.2-201ENST00000589496 5702 ntBASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHGC4Q9Y5F7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 MIR513A2-201ENST00000385249 127 ntBASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 SNORA36B-201ENST00000410438 131 ntBASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 VDAC1P3-201ENST00000434069 851 ntBASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 AL158147.1-201ENST00000443970 75 ntBASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 SNRPGP8-201ENST00000454064 226 ntBASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 Y_RNA.692-201ENST00000516627 105 ntBASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 IGKV2D-19-201ENST00000523346 262 ntBASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 MIR378D2-201ENST00000580636 98 ntBASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 AL670379.3-201ENST00000605040 251 ntBASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 MIR548AY-201ENST00000617669 107 ntBASIC4.06□□□□□ -1.76
PCDHGC4Q9Y5F7 AC034229.5-201ENST00000624258 185 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms