Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 MTCYBP6-201ENST00000441810 138 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 AL137792.2-201ENST00000443484 235 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.67□□□□□ -1.98
PKP3Q9Y446 AC087477.1-201ENST00000465747 340 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 AC103975.1-201ENST00000482506 483 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 AF186996.7-201ENST00000492781 209 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.67□□□□□ -1.98
PKP3Q9Y446 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.67□□□□□ -1.98
PKP3Q9Y446 RNU6-567P-201ENST00000516746 107 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.67□□□□□ -1.98
PKP3Q9Y446 ELOCP31-201ENST00000540463 467 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 AL442663.2-201ENST00000554385 511 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 AC020661.2-201ENST00000560114 134 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 AC004584.2-201ENST00000570407 410 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 SNRPGP17-201ENST00000603780 214 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 AL034555.1-201ENST00000604816 211 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 AL353621.2-201ENST00000605340 133 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 RPL23AP88-201ENST00000605759 454 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 MIR7157-201ENST00000635801 60 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 AL450472.1-202ENST00000637286 180 ntBASIC2.67□□□□□ -1.98
PKP3Q9Y446 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PKP3Q9Y446 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PKP3Q9Y446 MAPK10-266ENST00000641066 6555 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 MTND4P27-201ENST00000450813 1354 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 RNU6-859P-201ENST00000362728 107 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 SNORA80A-201ENST00000363922 136 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 Y_RNA.252-201ENST00000364556 101 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 NDUFB4P4-201ENST00000404822 243 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 MTCYBP2-201ENST00000407745 171 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 RNU6-1328P-201ENST00000410938 106 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 RPL19P1-201ENST00000411635 428 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 AC008267.5-201ENST00000424928 265 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PKP3Q9Y446 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.66□□□□□ -1.98
PKP3Q9Y446 AC092423.1-201ENST00000430165 186 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 MTCO3P29-201ENST00000432119 779 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 MICF-203ENST00000432679 129 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 Z82188.1-201ENST00000436709 154 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.66□□□□□ -1.98
PKP3Q9Y446 RPL21P2-201ENST00000440049 481 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.66□□□□□ -1.98
PKP3Q9Y446 snoU13.30-201ENST00000458951 104 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 RPS27AP9-201ENST00000477681 438 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 AC090096.1-201ENST00000489168 390 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 HMGB1P35-201ENST00000503360 598 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 AC021146.2-201ENST00000504736 556 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 RNU7-175P-201ENST00000515915 61 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 SNORD116.3-201ENST00000517176 78 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 AC027176.1-201ENST00000560204 514 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.66□□□□□ -1.98
PKP3Q9Y446 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.66□□□□□ -1.98
PKP3Q9Y446 MIR3199-1-201ENST00000582434 88 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 MIR3171-201ENST00000584270 74 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 Z98751.3-201ENST00000604447 521 ntBASIC2.66□□□□□ -1.98
PKP3Q9Y446 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.66□□□□□ -1.98
PKP3Q9Y446 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
PKP3Q9Y446 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.66□□□□□ -1.98
PKP3Q9Y446 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
PKP3Q9Y446 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.66□□□□□ -1.98
PKP3Q9Y446 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PKP3Q9Y446 RNU6-525P-201ENST00000363685 104 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 Y_RNA.405-201ENST00000383979 100 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 Y_RNA.451-201ENST00000384200 100 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 Y_RNA.524-201ENST00000384564 100 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 Y_RNA.561-201ENST00000384694 100 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 RNU6-308P-201ENST00000390957 107 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 SNORA12.2-201ENST00000391040 156 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 AC018865.2-201ENST00000423631 129 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 RPL30P4-201ENST00000429309 333 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 AL035666.1-201ENST00000446195 348 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.65□□□□□ -1.99
PKP3Q9Y446 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.65□□□□□ -1.99
PKP3Q9Y446 AC105758.1-201ENST00000506038 399 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 AC096725.1-201ENST00000514266 313 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 RN7SKP132-201ENST00000516001 208 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 Y_RNA.706-201ENST00000516933 99 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 SCARNA3-201ENST00000517097 143 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 COX6CP5-201ENST00000527162 228 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 AC104581.2-201ENST00000572227 430 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 AC010928.2-201ENST00000588017 287 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 AL078605.1-201ENST00000603529 500 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 AL670379.2-201ENST00000604983 252 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 AC100812.1-201ENST00000607622 580 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 AC137590.2-201ENST00000619709 240 ntBASIC2.65□□□□□ -1.99
PKP3Q9Y446 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PKP3Q9Y446 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PKP3Q9Y446 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.65□□□□□ -1.99
PKP3Q9Y446 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PKP3Q9Y446 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PKP3Q9Y446 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PKP3Q9Y446 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.64□□□□□ -1.99
PKP3Q9Y446 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.64□□□□□ -1.99
PKP3Q9Y446 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PKP3Q9Y446 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PKP3Q9Y446 SNORD115-32-201ENST00000364079 82 ntBASIC2.64□□□□□ -1.99
PKP3Q9Y446 Y_RNA.314-201ENST00000365114 102 ntBASIC2.64□□□□□ -1.99
PKP3Q9Y446 MIR627-201ENST00000384979 97 ntBASIC2.64□□□□□ -1.99
PKP3Q9Y446 MIR218-1-201ENST00000384999 110 ntBASIC2.64□□□□□ -1.99
PKP3Q9Y446 MIR625-201ENST00000385047 85 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms