Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 MIR1261-201ENST00000408659 82 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 SNRPGP13-201ENST00000442212 177 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 ZNF114P1-201ENST00000453500 292 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 AL163973.1-201ENST00000484753 577 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 RNU6-856P-201ENST00000516959 98 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 CYCSP23-201ENST00000519781 313 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 AC106038.2-201ENST00000520706 568 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 AC023050.3-201ENST00000541142 333 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 CYP4A27P-201ENST00000567218 190 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 MIR3915-201ENST00000578518 97 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 AL022161.1-201ENST00000604390 213 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 AC092354.1-201ENST00000606057 376 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 AL050343.2-201ENST00000607338 280 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 AC104010.1-201ENST00000616889 150 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 AC008147.4-201ENST00000617570 1204 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 AC097520.1-201ENST00000624435 385 ntBASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CHTOPQ9Y3Y2 SNORD114-1-201ENST00000362705 72 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 Y_RNA.169-201ENST00000363745 96 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 RNU6-336P-201ENST00000364891 107 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 Y_RNA.576-201ENST00000384781 102 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 MIR583-201ENST00000384846 75 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 AF228730.1-201ENST00000397972 663 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 MIR1289-2-201ENST00000408360 111 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 MTND2P18-201ENST00000419962 1030 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 CETN4P-201ENST00000432407 469 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 EPS15P1-201ENST00000448836 336 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 AMD1P1-201ENST00000457220 922 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 UBL5P3-201ENST00000475112 231 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 RPS23P4-201ENST00000487908 423 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 AC104564.1-201ENST00000493028 407 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 SNORD116-28-201ENST00000516123 91 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 AK6P1-201ENST00000540219 478 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 AC027807.1-201ENST00000559921 996 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 MIR3664-201ENST00000579074 99 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 MIR3945-201ENST00000581853 98 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 AC138749.5-201ENST00000611461 208 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 AC027807.2-201ENST00000616099 408 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 AC116165.2-201ENST00000616705 206 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 AC092140.2-201ENST00000618027 521 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 AF246928.1-201ENST00000623768 87 ntBASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CHTOPQ9Y3Y2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 MTND4P4-201ENST00000439033 1366 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 Y_RNA.22-201ENST00000362492 102 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 RNU6-552P-201ENST00000362869 119 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 RNU1-76P-201ENST00000362903 159 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 RNU5F-7P-201ENST00000363696 115 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 RNU5E-5P-201ENST00000365379 116 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 SNORD116-8-201ENST00000384365 95 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 MTND1P26-201ENST00000440488 538 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 UBE2D3P4-201ENST00000441973 436 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 AL513124.1-201ENST00000450410 614 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 RNU6-250P-201ENST00000516958 103 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 OSBPL9P5-201ENST00000542581 171 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 MTND3P12-201ENST00000559068 328 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 AC109446.2-201ENST00000567872 497 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 SNORA59B-202ENST00000578183 701 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 MIR4255-201ENST00000579351 72 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 AC025811.1-201ENST00000604312 472 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 AL353149.1-201ENST00000610667 244 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 AL136221.1-201ENST00000621449 509 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 AC009878.1-201ENST00000621819 340 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 AC007494.3-201ENST00000624660 743 ntBASIC0.99□□□□□ -2.25
CHTOPQ9Y3Y2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CHTOPQ9Y3Y2 RNU6-1123P-201ENST00000362347 106 ntBASIC0.98□□□□□ -2.25
CHTOPQ9Y3Y2 RNU4-21P-201ENST00000362802 126 ntBASIC0.98□□□□□ -2.25
CHTOPQ9Y3Y2 RNU6-1287P-201ENST00000362914 107 ntBASIC0.98□□□□□ -2.25
CHTOPQ9Y3Y2 RNU6-1060P-201ENST00000384664 107 ntBASIC0.98□□□□□ -2.25
CHTOPQ9Y3Y2 MT-TH-201ENST00000387441 69 ntBASIC0.98□□□□□ -2.25
CHTOPQ9Y3Y2 SNORA26.3-201ENST00000391119 136 ntBASIC0.98□□□□□ -2.25
CHTOPQ9Y3Y2 SNORA11.2-201ENST00000408318 127 ntBASIC0.98□□□□□ -2.25
CHTOPQ9Y3Y2 POLR2J4-204ENST00000418424 324 ntBASIC0.98□□□□□ -2.25
CHTOPQ9Y3Y2 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.98□□□□□ -2.25
CHTOPQ9Y3Y2 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.98□□□□□ -2.25
CHTOPQ9Y3Y2 CYCSP46-201ENST00000423569 204 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms