Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 AC006445.2-201ENST00000510061 472 ntBASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 AC100821.1-201ENST00000523153 2479 ntBASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 AC021269.2-201ENST00000532318 330 ntBASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 MIR3609-201ENST00000582661 80 ntBASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 PCGEM1.1-201ENST00000613431 131 ntBASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 AC013791.1-201ENST00000616619 62 ntBASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 AC091905.2-201ENST00000623143 306 ntBASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 AC010332.2-201ENST00000613083 1904 ntBASIC4.25□□□□□ -1.73
HCN4Q9Y3Q4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 RNA5SP151-201ENST00000365632 117 ntBASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 MIR93-201ENST00000385024 80 ntBASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 MIR626-201ENST00000385032 94 ntBASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 RNU6-578P-201ENST00000390980 103 ntBASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 RNA5SP201-201ENST00000410316 124 ntBASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 RNA5SP104-201ENST00000410989 118 ntBASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 RN7SL323P-201ENST00000494712 295 ntBASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 RNA5SP309-201ENST00000516670 106 ntBASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 SNORD19.2-201ENST00000516978 73 ntBASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 AL034555.1-201ENST00000604816 211 ntBASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 AC073308.1-201ENST00000623696 305 ntBASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 AC002546.1-201ENST00000588041 2504 ntBASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 MAPK10-372ENST00000641954 3413 ntBASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HCN4Q9Y3Q4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 RNA5SP205-201ENST00000364653 136 ntBASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 RNU6-748P-201ENST00000384648 107 ntBASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 RNU6-376P-201ENST00000384731 106 ntBASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 SNORA40-201ENST00000388090 126 ntBASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 RNU6-710P-201ENST00000410424 105 ntBASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 snoU13.14-201ENST00000459372 104 ntBASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 HMGN2P15-201ENST00000585707 270 ntBASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 AC091152.3-201ENST00000604227 325 ntBASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 TCL6_2.1-201ENST00000615162 119 ntBASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 AC010329.5-201ENST00000623497 2174 ntBASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HCN4Q9Y3Q4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 RNU6-1010P-201ENST00000362757 107 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 RNU6-529P-201ENST00000363383 104 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 RNU6-899P-201ENST00000363947 107 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 SNORD115-30-201ENST00000364117 82 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 SNORA38.1-201ENST00000364172 131 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 Y_RNA.243-201ENST00000364481 109 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 RNU1-44P-201ENST00000384453 163 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 U8.11-201ENST00000384699 133 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 U8.12-201ENST00000384701 133 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 SNORA26.5-201ENST00000391215 123 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 RNA5SP39-201ENST00000411245 120 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 AC023141.4-201ENST00000412031 328 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 PTGES3P4-201ENST00000426243 356 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 AL135790.2-201ENST00000437701 267 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 U8.18-201ENST00000459285 133 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 RPL31P41-201ENST00000477967 372 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 PPBPP1-201ENST00000510807 373 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 RNU6-107P-201ENST00000516643 102 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 AC069240.1-201ENST00000548774 375 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 EIF4A1P12-201ENST00000551910 141 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 SNORD11B-201ENST00000607707 90 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 AC018692.3-201ENST00000623929 123 ntBASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HCN4Q9Y3Q4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.73
HCN4Q9Y3Q4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
HCN4Q9Y3Q4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HCN4Q9Y3Q4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HCN4Q9Y3Q4 Y_RNA.287-201ENST00000364853 94 ntBASIC4.21□□□□□ -1.74
HCN4Q9Y3Q4 RNU6-19P-201ENST00000384718 107 ntBASIC4.21□□□□□ -1.74
HCN4Q9Y3Q4 RN7SKP167-201ENST00000411047 285 ntBASIC4.21□□□□□ -1.74
HCN4Q9Y3Q4 HMGN2P16-201ENST00000456802 261 ntBASIC4.21□□□□□ -1.74
HCN4Q9Y3Q4 RNA5SP246-201ENST00000458909 119 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms