Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 AL133383.2-201ENST00000622958 2336 ntBASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 RNU6-727P-201ENST00000363592 107 ntBASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 Y_RNA.357-201ENST00000365487 109 ntBASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 SNORA57.1-201ENST00000391227 145 ntBASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 RNU6-381P-201ENST00000391259 108 ntBASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 MIR1193-201ENST00000408109 78 ntBASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 AC099548.1-201ENST00000421443 426 ntBASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 NDUFB1P1-201ENST00000435191 180 ntBASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 AL135790.2-201ENST00000437701 267 ntBASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 AL133162.1-201ENST00000463228 453 ntBASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 AC115990.1-201ENST00000526957 301 ntBASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 AC011602.1-201ENST00000546484 331 ntBASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 AL078604.3-201ENST00000615580 211 ntBASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
AP4E1Q9UPM8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 AC002543.1-201ENST00000299783 1954 ntBASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 AC068700.1-201ENST00000565862 3754 ntBASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 RNU6-151P-201ENST00000364158 107 ntBASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 Y_RNA.629-201ENST00000411368 105 ntBASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 CYCSP48-201ENST00000417124 323 ntBASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 AC005300.1-201ENST00000428401 373 ntBASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 AC010409.1-201ENST00000487382 476 ntBASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 RNA5SP272-201ENST00000516095 111 ntBASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 RNU6-436P-201ENST00000516171 114 ntBASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 RNA5SP309-201ENST00000516670 106 ntBASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 MIR5187-201ENST00000583479 76 ntBASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 RNU1-30P-201ENST00000606575 163 ntBASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 AP000553.6-201ENST00000641242 118 ntBASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
AP4E1Q9UPM8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
AP4E1Q9UPM8 AC100821.1-201ENST00000523153 2479 ntBASIC3.84□□□□□ -1.8
AP4E1Q9UPM8 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
AP4E1Q9UPM8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 RNU6-50P-201ENST00000362356 103 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 RNU6-454P-201ENST00000364292 107 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 RNU6-1264P-201ENST00000383891 107 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 U3.26-201ENST00000391236 204 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 MIR208B-201ENST00000401172 77 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 AC012308.1-201ENST00000451232 178 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 U8.19-201ENST00000459095 133 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 AC103975.1-201ENST00000482506 483 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 RNU2-58P-201ENST00000516403 183 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 RNU7-121P-201ENST00000516604 62 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 RN7SKP289-201ENST00000517244 295 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 TGIF1P1-201ENST00000558095 802 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 MIR3684-201ENST00000579779 74 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 AC090616.3-201ENST00000582184 217 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 MIR3136-201ENST00000583498 78 ntBASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
AP4E1Q9UPM8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 Y_RNA.415-201ENST00000384012 112 ntBASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 SNORA18.3-201ENST00000384122 132 ntBASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 RNU6-239P-201ENST00000390990 99 ntBASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 U3.40-201ENST00000408706 208 ntBASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 RNA5SP129-201ENST00000410276 118 ntBASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 SNORA57.3-201ENST00000411095 141 ntBASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 AC026402.1-201ENST00000513642 170 ntBASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 FAM35BP-202ENST00000497389 3337 ntBASIC3.82□□□□□ -1.8
AP4E1Q9UPM8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
AP4E1Q9UPM8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
AP4E1Q9UPM8 RNU6-801P-201ENST00000364087 105 ntBASIC3.81□□□□□ -1.8
AP4E1Q9UPM8 U8.11-201ENST00000384699 133 ntBASIC3.81□□□□□ -1.8
AP4E1Q9UPM8 U8.12-201ENST00000384701 133 ntBASIC3.81□□□□□ -1.8
AP4E1Q9UPM8 EI24P2-201ENST00000397776 1076 ntBASIC3.81□□□□□ -1.8
AP4E1Q9UPM8 RNA5SP475-201ENST00000410568 110 ntBASIC3.81□□□□□ -1.8
AP4E1Q9UPM8 CR769767.1-201ENST00000436337 346 ntBASIC3.81□□□□□ -1.8
AP4E1Q9UPM8 U8.18-201ENST00000459285 133 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms