Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 RNU5A-1-201ENST00000362698 116 ntBASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 U3.13-201ENST00000364804 214 ntBASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 RNU6-326P-201ENST00000365480 107 ntBASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 RNU6-1074P-201ENST00000383995 104 ntBASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 MIR196B-201ENST00000384852 84 ntBASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 RPL23AP48-201ENST00000406913 488 ntBASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 AL591806.2-201ENST00000433122 173 ntBASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 AC010401.1-201ENST00000463867 348 ntBASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 SNORA31.22-201ENST00000517204 135 ntBASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 LRRC37A5P-203ENST00000580181 585 ntBASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 AL139811.1-201ENST00000424779 2299 ntBASIC4.52□□□□□ -1.69
COL17A1Q9UMD9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 RNU6-482P-201ENST00000391068 107 ntBASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 RNA5SP494-201ENST00000410653 129 ntBASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 RNU6-607P-201ENST00000411283 108 ntBASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 USP9YP7-201ENST00000436723 430 ntBASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 PIGFP3-201ENST00000441918 722 ntBASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 USP9YP32-201ENST00000452432 430 ntBASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 AC087588.1-201ENST00000462203 316 ntBASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 MTND3P25-201ENST00000509243 135 ntBASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 SNORA25.12-201ENST00000516202 82 ntBASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 AC115990.1-201ENST00000526957 301 ntBASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 AC027176.1-201ENST00000560204 514 ntBASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 AC002545.1-201ENST00000592511 181 ntBASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.51□□□□□ -1.69
COL17A1Q9UMD9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 RNU4-84P-201ENST00000364200 139 ntBASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 MIR539-201ENST00000365690 78 ntBASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 Y_RNA.388-201ENST00000383919 113 ntBASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 RNU6-1179P-201ENST00000384667 107 ntBASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 RN7SKP272-201ENST00000516988 232 ntBASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 CPDP1-201ENST00000579660 283 ntBASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.5□□□□□ -1.69
COL17A1Q9UMD9 UBE2L2-201ENST00000254302 429 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 RNU6-859P-201ENST00000362728 107 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 Y_RNA.286-201ENST00000364813 102 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 Y_RNA.324-201ENST00000365165 102 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 Y_RNA.357-201ENST00000365487 109 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 RNU6-476P-201ENST00000384726 107 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 MIR578-201ENST00000384828 96 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 AL353621.1-201ENST00000418219 243 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 EBAG9P1-201ENST00000418955 543 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 SEPT7P4-201ENST00000437076 306 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 RNU6-659P-201ENST00000516454 104 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 IGKV3-31-201ENST00000523109 329 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 MIR6817-201ENST00000615588 66 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 AC011476.5-201ENST00000615594 130 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 AC240442.1-201ENST00000616055 283 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 MTND5P35-201ENST00000557537 1720 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 MAPK10-362ENST00000641864 4484 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 ZNF299P-201ENST00000406845 1804 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 RNA5SP68-201ENST00000363885 119 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 Y_RNA.358-201ENST00000365491 99 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 RNU6-395P-201ENST00000365662 106 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 RNU6-1289P-201ENST00000384431 106 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 Y_RNA.534-201ENST00000384599 112 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 Y_RNA.542-201ENST00000384641 111 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 Y_RNA.563-201ENST00000384707 108 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 RPL21P75-201ENST00000396599 483 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 RPL21P28-201ENST00000401418 483 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 RNY4P30-201ENST00000410216 95 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 AL590556.1-201ENST00000423231 483 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 RPL21P39-201ENST00000463605 483 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 AP001025.1-201ENST00000486139 332 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 AC132942.1-201ENST00000486753 483 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 AC093591.1-201ENST00000491435 481 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 RPL21P16-201ENST00000495531 483 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 MLLT10P2-201ENST00000506434 249 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 RNU4-60P-201ENST00000517239 135 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms