Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC008739.2-201ENST00000597006 317 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 MIR4727-201ENST00000622232 55 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 RNU1-14P-201ENST00000362759 152 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 Y_RNA.310-201ENST00000365063 113 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 Y_RNA.497-201ENST00000384447 98 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 RNU6-239P-201ENST00000390990 99 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 SNORA12-201ENST00000391162 147 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 AL162725.1-201ENST00000435405 301 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 RPL23AP46-201ENST00000438548 490 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 RPS29P2-201ENST00000479278 136 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 PPBPP1-201ENST00000510807 373 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 AC099522.1-202ENST00000514718 367 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 MIR4431-201ENST00000579990 94 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 Y_RNA.802-201ENST00000614892 130 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 CR392039.5-201ENST00000623201 510 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 GABRG2-229ENST00000641017 3628 ntBASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXD3Q9UJU5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 AC134026.1-201ENST00000623249 2239 ntBASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 Y_RNA.293-201ENST00000364908 93 ntBASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 SNORA37-201ENST00000384504 129 ntBASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 Y_RNA.568-201ENST00000384742 113 ntBASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 MIR526A2-201ENST00000390198 65 ntBASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 Z98742.2-201ENST00000431564 187 ntBASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 CR769767.1-201ENST00000436337 346 ntBASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 AL162151.2-201ENST00000448875 158 ntBASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 AC091153.1-201ENST00000466297 402 ntBASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 RNA5SP112-201ENST00000515937 99 ntBASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 AC069294.1-201ENST00000608397 350 ntBASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 Y_RNA.778-201ENST00000620203 90 ntBASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 AL161912.2-201ENST00000565707 3007 ntBASIC3.78□□□□□ -1.8
FOXD3Q9UJU5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
FOXD3Q9UJU5 AC006504.1-201ENST00000562493 3666 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 SNORD74.4-201ENST00000364129 80 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 Y_RNA.215-201ENST00000364204 112 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 RNU6-1305P-201ENST00000364353 104 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 RNU6-578P-201ENST00000390980 103 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 RNA5SP354-201ENST00000391247 136 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 RNA5SP39-201ENST00000411245 120 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 AL356095.1-201ENST00000417217 199 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 AC074290.1-201ENST00000448883 135 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 RNU7-121P-201ENST00000516604 62 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 MIR4474-201ENST00000579189 78 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 AC103810.1-201ENST00000579873 453 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 RPL30P11-203ENST00000598995 310 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 AC099778.2-201ENST00000610904 211 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 OTUD4P1-201ENST00000237841 3067 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 AC016588.2-201ENST00000632484 3021 ntBASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
FOXD3Q9UJU5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 RNU6-1083P-201ENST00000384022 107 ntBASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 RNU6-376P-201ENST00000384731 106 ntBASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 MIR300-201ENST00000401138 83 ntBASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 MIR1185-2-201ENST00000408687 86 ntBASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 MIR1179-201ENST00000408703 91 ntBASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 HMGN2P9-201ENST00000476875 229 ntBASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 RNU5F-4P-201ENST00000516581 114 ntBASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 MIR4765-201ENST00000585007 77 ntBASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 AC025754.2-201ENST00000606491 432 ntBASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 Z82217.1-201ENST00000625157 8149 ntBASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 AL159152.1-201ENST00000635019 2587 ntBASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXD3Q9UJU5 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms