Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC022022.2-201ENST00000602989 360 ntBASIC-0.47□□□□□ -2.48
SCN11AQ9UI33 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.47□□□□□ -2.48
SCN11AQ9UI33 RNU6-386P-201ENST00000362650 107 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 RPS26P42-201ENST00000413485 326 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 SNX3P1X-201ENST00000414887 175 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 MTCO3P1-205ENST00000422088 832 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 CECR9-201ENST00000453421 199 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 snoU13.14-201ENST00000459372 104 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 RPL32P14-201ENST00000463196 378 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 SNORD60.2-201ENST00000516883 86 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 AL451064.1-201ENST00000607718 471 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 AC138749.5-201ENST00000611461 208 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 AC090517.2-201ENST00000614966 680 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 uc_338.36-201ENST00000622331 158 ntBASIC-0.47□□□□□ -2.49
SCN11AQ9UI33 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.48□□□□□ -2.49
SCN11AQ9UI33 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.48□□□□□ -2.49
SCN11AQ9UI33 RNU6-622P-201ENST00000384272 103 ntBASIC-0.48□□□□□ -2.49
SCN11AQ9UI33 MIR525-201ENST00000384978 85 ntBASIC-0.48□□□□□ -2.49
SCN11AQ9UI33 RNU6-754P-201ENST00000391166 107 ntBASIC-0.48□□□□□ -2.49
SCN11AQ9UI33 SNORA40.8-201ENST00000411034 126 ntBASIC-0.48□□□□□ -2.49
SCN11AQ9UI33 AC123900.1-201ENST00000420390 96 ntBASIC-0.48□□□□□ -2.49
SCN11AQ9UI33 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.48□□□□□ -2.49
SCN11AQ9UI33 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.48□□□□□ -2.49
SCN11AQ9UI33 AC023194.1-201ENST00000493084 308 ntBASIC-0.48□□□□□ -2.49
SCN11AQ9UI33 RNU6-1183P-201ENST00000517054 60 ntBASIC-0.48□□□□□ -2.49
SCN11AQ9UI33 AC007751.1-201ENST00000529260 376 ntBASIC-0.48□□□□□ -2.49
SCN11AQ9UI33 AP001981.2-201ENST00000603241 418 ntBASIC-0.48□□□□□ -2.49
SCN11AQ9UI33 AL596245.1-201ENST00000618994 362 ntBASIC-0.48□□□□□ -2.49
SCN11AQ9UI33 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 RNU6-747P-201ENST00000390928 104 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 RNU6-241P-201ENST00000391148 104 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 RNU6-952P-201ENST00000391164 108 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 RNU6-77P-201ENST00000410554 91 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 BTF3P11-201ENST00000426582 477 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 AC005345.1-201ENST00000431868 217 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 RPS15AP10-201ENST00000432472 382 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 MTCO3P10-201ENST00000455912 772 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 SNORA70.12-201ENST00000516084 153 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 RNA5SP268-201ENST00000516828 124 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 AC022868.1-201ENST00000517767 391 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 MIR4782-201ENST00000577987 79 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 VN1R88P-201ENST00000596787 292 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 AL592221.1-201ENST00000605266 382 ntBASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.49□□□□□ -2.49
SCN11AQ9UI33 RNY4P24-201ENST00000362735 96 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 RNA5SP275-201ENST00000363936 118 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 RNU2-23P-201ENST00000410545 195 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 AL139396.1-201ENST00000421137 167 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 ISCA1P1-201ENST00000426679 387 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 USP9YP14-201ENST00000430663 563 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 GTF2IP3-201ENST00000433887 494 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 STAG3L5P-204ENST00000443759 179 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 AC003071.1-201ENST00000451219 789 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 MTCO2P18-201ENST00000457151 658 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 MED28P2-201ENST00000475771 317 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 AC013828.1-201ENST00000481845 158 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 MTND4LP26-201ENST00000518144 282 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 AC004223.2-201ENST00000590309 544 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 AC005176.2-201ENST00000596933 147 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 FTX_2.1-201ENST00000618816 94 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 SNORD111-201ENST00000408139 94 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 C1DP2-201ENST00000418167 426 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 RAC1P6-201ENST00000423911 575 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 AL162725.1-201ENST00000435405 301 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 C1DP4-201ENST00000455429 424 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 SCARNA8-201ENST00000515924 131 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 SEPT14P17-201ENST00000617978 177 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 AC004009.2-201ENST00000623016 728 ntBASIC-0.5□□□□□ -2.49
SCN11AQ9UI33 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.51□□□□□ -2.49
SCN11AQ9UI33 RNY3-201ENST00000365484 102 ntBASIC-0.51□□□□□ -2.49
SCN11AQ9UI33 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.51□□□□□ -2.49
SCN11AQ9UI33 RNU6-878P-201ENST00000384578 110 ntBASIC-0.51□□□□□ -2.49
SCN11AQ9UI33 RN7SKP266-201ENST00000410232 287 ntBASIC-0.51□□□□□ -2.49
SCN11AQ9UI33 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.51□□□□□ -2.49
SCN11AQ9UI33 MTND2P21-201ENST00000436242 1042 ntBASIC-0.51□□□□□ -2.49
SCN11AQ9UI33 AC104695.3-201ENST00000604052 296 ntBASIC-0.51□□□□□ -2.49
SCN11AQ9UI33 MIR8076-201ENST00000611401 83 ntBASIC-0.51□□□□□ -2.49
SCN11AQ9UI33 AL118556.2-201ENST00000614375 824 ntBASIC-0.51□□□□□ -2.49
SCN11AQ9UI33 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.51□□□□□ -2.49
SCN11AQ9UI33 RNU6-858P-201ENST00000362436 107 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 RNU6-543P-201ENST00000362576 108 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 SNORD114-5-201ENST00000362928 70 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms