Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 Y_RNA.157-201ENST00000363638 102 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 Y_RNA.166-201ENST00000363730 102 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 RNU6-371P-201ENST00000364283 108 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 Y_RNA.231-201ENST00000364358 102 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 RNU6-1227P-201ENST00000383981 107 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 RNU6-38P-201ENST00000384085 107 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 MIR578-201ENST00000384828 96 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 MIR95-201ENST00000385072 81 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 MIR514A2-201ENST00000385131 88 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 MIR514A3-201ENST00000385132 88 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 SNORA75.4-201ENST00000391278 119 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 SNORA26.9-201ENST00000391322 122 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 EIF1AXP1-201ENST00000419267 435 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 AF228730.4-201ENST00000421457 183 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 CALM2P2-201ENST00000428512 440 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 IFNA20P-201ENST00000436840 528 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 AC079781.2-201ENST00000446424 169 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 AL360271.2-201ENST00000447710 161 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 CYP2C59P-201ENST00000457790 269 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 RNU6-333P-201ENST00000459117 107 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 Y_RNA.632-201ENST00000459189 102 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 RNU7-66P-201ENST00000459469 62 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 RNU6-329P-201ENST00000459618 107 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 AL163973.1-201ENST00000484753 577 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 CKS1BP2-201ENST00000497342 240 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 RBBP4P6-201ENST00000508098 202 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 RNU6-410P-201ENST00000517006 107 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 AC020661.2-201ENST00000560114 134 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 MIR4529-201ENST00000578110 78 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 MIR3942-201ENST00000585264 109 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 AL627230.6-201ENST00000611129 280 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 AC084781.2-201ENST00000615568 161 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 SCARNA4-202ENST00000625402 129 ntBASIC2.24□□□□□ -2.05
CLIP2Q9UDT6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 RNU6-1010P-201ENST00000362757 107 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 RNU6-552P-201ENST00000362869 119 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 RNU6-1097P-201ENST00000363586 107 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 RNU6-1179P-201ENST00000384667 107 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 MIR10A-201ENST00000385043 110 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 RNU6-903P-201ENST00000391270 109 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 AL133475.1-201ENST00000404414 305 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 RNA5SP118-201ENST00000410385 109 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 AL030996.1-201ENST00000411430 235 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 MTCO2P12-201ENST00000427426 682 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 PRPS1P1-201ENST00000445305 876 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 AL356010.1-201ENST00000456364 102 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 HMGN2P23-201ENST00000456759 269 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 GMFBP1-201ENST00000467831 427 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 AC055731.1-201ENST00000474387 401 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 AC083904.1-201ENST00000487828 231 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 HMGB1P30-201ENST00000492455 606 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 RNU6-237P-201ENST00000515985 71 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 AC109329.1-201ENST00000518744 317 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 PSMA3P-201ENST00000555485 635 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 MIR3126-201ENST00000577443 74 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 MIR4775-201ENST00000581168 75 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 MIR4424-201ENST00000585257 86 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 AL360085.1-201ENST00000604713 532 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 MTND4LP32-201ENST00000636111 270 ntBASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
CLIP2Q9UDT6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 RNU6-858P-201ENST00000362436 107 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 RNU6-1252P-201ENST00000363054 104 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 SNORD114-19-201ENST00000363072 75 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 RNA5SP99-201ENST00000364020 114 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 RNU6-384P-201ENST00000364900 104 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 RNU4-48P-201ENST00000365559 182 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 Y_RNA.378-201ENST00000365652 113 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 RNU6-1029P-201ENST00000384109 107 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 RNU6-474P-201ENST00000384243 107 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 Y_RNA.460-201ENST00000384255 102 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 SNORD116-29-201ENST00000384516 83 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 MTND3P8-201ENST00000412909 339 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 MTND2P23-201ENST00000422990 651 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 HMGB1P18-201ENST00000438801 619 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 RPL23AP63-201ENST00000498752 471 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 MRPS17P9-201ENST00000511924 393 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 RNU6-1088P-201ENST00000516850 104 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms