Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AP002770.2-201ENST00000543613 532 ntBASIC3.69□□□□□ -1.82
USP35Q9P2H5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.69□□□□□ -1.82
USP35Q9P2H5 MIR3670-2-201ENST00000582974 65 ntBASIC3.69□□□□□ -1.82
USP35Q9P2H5 MIR3670-1-201ENST00000584160 65 ntBASIC3.69□□□□□ -1.82
USP35Q9P2H5 MIR3670-3-201ENST00000584855 65 ntBASIC3.69□□□□□ -1.82
USP35Q9P2H5 MIR3670-4-201ENST00000612260 65 ntBASIC3.69□□□□□ -1.82
USP35Q9P2H5 AC104260.1-201ENST00000616660 539 ntBASIC3.69□□□□□ -1.82
USP35Q9P2H5 AC137590.2-201ENST00000619709 240 ntBASIC3.69□□□□□ -1.82
USP35Q9P2H5 AC098657.3-201ENST00000620434 263 ntBASIC3.69□□□□□ -1.82
USP35Q9P2H5 MTND5P9-201ENST00000503854 1755 ntBASIC3.68□□□□□ -1.82
USP35Q9P2H5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.68□□□□□ -1.82
USP35Q9P2H5 Y_RNA.474-201ENST00000384341 102 ntBASIC3.68□□□□□ -1.82
USP35Q9P2H5 RNA5SP21-201ENST00000410917 96 ntBASIC3.68□□□□□ -1.82
USP35Q9P2H5 AC021146.2-201ENST00000504736 556 ntBASIC3.68□□□□□ -1.82
USP35Q9P2H5 Y_RNA.708-201ENST00000516950 96 ntBASIC3.68□□□□□ -1.82
USP35Q9P2H5 AC134698.4-201ENST00000523451 826 ntBASIC3.68□□□□□ -1.82
USP35Q9P2H5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.68□□□□□ -1.82
USP35Q9P2H5 MIR5696-201ENST00000578474 85 ntBASIC3.68□□□□□ -1.82
USP35Q9P2H5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.68□□□□□ -1.82
USP35Q9P2H5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.68□□□□□ -1.82
USP35Q9P2H5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.68□□□□□ -1.82
USP35Q9P2H5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.68□□□□□ -1.82
USP35Q9P2H5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.68□□□□□ -1.82
USP35Q9P2H5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.68□□□□□ -1.82
USP35Q9P2H5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.67□□□□□ -1.82
USP35Q9P2H5 SNORD114-30-201ENST00000364448 72 ntBASIC3.67□□□□□ -1.82
USP35Q9P2H5 Y_RNA.263-201ENST00000364659 114 ntBASIC3.67□□□□□ -1.82
USP35Q9P2H5 AC112220.1-201ENST00000434628 355 ntBASIC3.67□□□□□ -1.82
USP35Q9P2H5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.67□□□□□ -1.82
USP35Q9P2H5 CBX3P7-201ENST00000532876 502 ntBASIC3.67□□□□□ -1.82
USP35Q9P2H5 AC109446.1-201ENST00000566172 220 ntBASIC3.67□□□□□ -1.82
USP35Q9P2H5 MIR4273-201ENST00000582824 84 ntBASIC3.67□□□□□ -1.82
USP35Q9P2H5 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.67□□□□□ -1.82
USP35Q9P2H5 AC011494.1-201ENST00000596454 237 ntBASIC3.67□□□□□ -1.82
USP35Q9P2H5 AC113139.1-201ENST00000605049 239 ntBASIC3.67□□□□□ -1.82
USP35Q9P2H5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.67□□□□□ -1.82
USP35Q9P2H5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP35Q9P2H5 ZNF658B-202ENST00000615961 3375 ntBASIC3.67□□□□□ -1.82
USP35Q9P2H5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
USP35Q9P2H5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
USP35Q9P2H5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP35Q9P2H5 SNORA36A-201ENST00000384221 132 ntBASIC3.66□□□□□ -1.82
USP35Q9P2H5 SNORA46.1-201ENST00000391069 153 ntBASIC3.66□□□□□ -1.82
USP35Q9P2H5 RNU6-1050P-201ENST00000410388 107 ntBASIC3.66□□□□□ -1.82
USP35Q9P2H5 AC093019.1-201ENST00000443135 252 ntBASIC3.66□□□□□ -1.82
USP35Q9P2H5 RPS29P21-201ENST00000496272 170 ntBASIC3.66□□□□□ -1.82
USP35Q9P2H5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.66□□□□□ -1.82
USP35Q9P2H5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.66□□□□□ -1.82
USP35Q9P2H5 AC096725.1-201ENST00000514266 313 ntBASIC3.66□□□□□ -1.82
USP35Q9P2H5 MRPS36P4-201ENST00000534436 298 ntBASIC3.66□□□□□ -1.82
USP35Q9P2H5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.66□□□□□ -1.82
USP35Q9P2H5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
USP35Q9P2H5 AL158827.2-201ENST00000602494 330 ntBASIC3.66□□□□□ -1.82
USP35Q9P2H5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
USP35Q9P2H5 PCGEM1.1-201ENST00000613431 131 ntBASIC3.66□□□□□ -1.82
USP35Q9P2H5 SCARNA4-201ENST00000629045 128 ntBASIC3.66□□□□□ -1.82
USP35Q9P2H5 AL691447.3-201ENST00000635020 330 ntBASIC3.66□□□□□ -1.82
USP35Q9P2H5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.66□□□□□ -1.82
USP35Q9P2H5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
USP35Q9P2H5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.65□□□□□ -1.82
USP35Q9P2H5 RNA5SP289-201ENST00000362332 137 ntBASIC3.65□□□□□ -1.83
USP35Q9P2H5 SNORD32B-201ENST00000364460 84 ntBASIC3.65□□□□□ -1.83
USP35Q9P2H5 RNU6-842P-201ENST00000384269 107 ntBASIC3.65□□□□□ -1.83
USP35Q9P2H5 Y_RNA.490-201ENST00000384413 102 ntBASIC3.65□□□□□ -1.83
USP35Q9P2H5 Y_RNA.597-201ENST00000410463 100 ntBASIC3.65□□□□□ -1.83
USP35Q9P2H5 RNA5SP494-201ENST00000410653 129 ntBASIC3.65□□□□□ -1.83
USP35Q9P2H5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.65□□□□□ -1.83
USP35Q9P2H5 AL353705.4-201ENST00000449661 238 ntBASIC3.65□□□□□ -1.83
USP35Q9P2H5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.65□□□□□ -1.83
USP35Q9P2H5 AC005741.1-201ENST00000511094 432 ntBASIC3.65□□□□□ -1.83
USP35Q9P2H5 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.65□□□□□ -1.83
USP35Q9P2H5 Z82195.2-201ENST00000612348 18351 ntBASIC3.65□□□□□ -1.83
USP35Q9P2H5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP35Q9P2H5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.64□□□□□ -1.83
USP35Q9P2H5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP35Q9P2H5 U3.9-201ENST00000363823 204 ntBASIC3.64□□□□□ -1.83
USP35Q9P2H5 RNU4-9P-201ENST00000364951 139 ntBASIC3.64□□□□□ -1.83
USP35Q9P2H5 Y_RNA.594-201ENST00000410373 140 ntBASIC3.64□□□□□ -1.83
USP35Q9P2H5 Z98742.3-201ENST00000418637 326 ntBASIC3.64□□□□□ -1.83
USP35Q9P2H5 AP000705.1-201ENST00000454567 350 ntBASIC3.64□□□□□ -1.83
USP35Q9P2H5 AC132942.1-201ENST00000486753 483 ntBASIC3.64□□□□□ -1.83
USP35Q9P2H5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.64□□□□□ -1.83
USP35Q9P2H5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.64□□□□□ -1.83
USP35Q9P2H5 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.64□□□□□ -1.83
USP35Q9P2H5 EIF4A1P12-201ENST00000551910 141 ntBASIC3.64□□□□□ -1.83
USP35Q9P2H5 AC016727.1-205ENST00000605437 569 ntBASIC3.64□□□□□ -1.83
USP35Q9P2H5 LARP7P1-201ENST00000605576 316 ntBASIC3.64□□□□□ -1.83
USP35Q9P2H5 AP000654.2-201ENST00000605633 586 ntBASIC3.64□□□□□ -1.83
USP35Q9P2H5 AL132765.2-201ENST00000610812 351 ntBASIC3.64□□□□□ -1.83
USP35Q9P2H5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP35Q9P2H5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP35Q9P2H5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
USP35Q9P2H5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
USP35Q9P2H5 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.63□□□□□ -1.83
USP35Q9P2H5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP35Q9P2H5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.63□□□□□ -1.83
USP35Q9P2H5 RNU6-1159P-201ENST00000362933 107 ntBASIC3.63□□□□□ -1.83
USP35Q9P2H5 RNU1-23P-201ENST00000363361 144 ntBASIC3.63□□□□□ -1.83
USP35Q9P2H5 RNU6-944P-201ENST00000364023 107 ntBASIC3.63□□□□□ -1.83
USP35Q9P2H5 SNORA25.6-201ENST00000364121 118 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms