Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 RPL23AP42-201ENST00000471152 471 ntBASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 CKS1BP2-201ENST00000497342 240 ntBASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 HMGN1P12-201ENST00000499125 195 ntBASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 RNU6-612P-201ENST00000516909 102 ntBASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 RNA5SP454-201ENST00000517231 127 ntBASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 CPDP1-201ENST00000579660 283 ntBASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 AC073410.2-201ENST00000603240 332 ntBASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 AC025754.2-201ENST00000606491 432 ntBASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 AC096772.1-201ENST00000609146 564 ntBASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 AC022306.2-201ENST00000617563 647 ntBASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
NLGN3Q9NZ94 RNU6-845P-201ENST00000362578 103 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 RNU6-1285P-201ENST00000363480 105 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 Y_RNA.151-201ENST00000363566 112 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 SNORA48.3-201ENST00000391081 134 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 RNU6-510P-201ENST00000391239 108 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 RNU2-63P-201ENST00000410792 194 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 RPL23AP95-201ENST00000426806 265 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 WARS2P1-201ENST00000429678 537 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 RPS15AP10-201ENST00000432472 382 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 snoU13.14-201ENST00000459372 104 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 AC130509.1-201ENST00000464158 433 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 AC090515.1-201ENST00000465295 476 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 AL121594.1-201ENST00000475906 575 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 PTP4A1P4-201ENST00000512479 322 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 RNU6-566P-201ENST00000516790 107 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 RNU7-30P-201ENST00000516835 62 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 AC091135.1-201ENST00000585943 307 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 AL713866.2-201ENST00000603579 219 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 AL133215.3-201ENST00000609801 448 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 AC009233.1-201ENST00000616477 371 ntBASIC2.12□□□□□ -2.07
NLGN3Q9NZ94 RNU6-212P-201ENST00000362642 104 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 Y_RNA.166-201ENST00000363730 102 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 U3.13-201ENST00000364804 214 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 SNORD81.2-201ENST00000365153 76 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 SNORA67.3-201ENST00000384366 140 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 RNU6-1222P-201ENST00000384615 107 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 RN7SKP158-201ENST00000410453 326 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 RNU6-1245P-201ENST00000411130 106 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 AP000275.1-201ENST00000411943 390 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 MTND3P9-201ENST00000429526 346 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 AL645568.3-201ENST00000433683 316 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 MTND4LP16-201ENST00000440828 295 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 IPO7P1-201ENST00000442031 636 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 PPP1R2P5-201ENST00000457256 603 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 RPL9P9-202ENST00000466501 579 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 SNRPGP7-201ENST00000469016 106 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 AC140059.1-201ENST00000489238 361 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 MTCO1P29-201ENST00000496868 288 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 Y_RNA.682-201ENST00000516457 100 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 AC109329.1-201ENST00000518744 317 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 CBX3P7-201ENST00000532876 502 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 AC093249.1-201ENST00000567049 203 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 AL138963.2-201ENST00000605137 226 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 uc_338.15-201ENST00000615470 191 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 AC012640.5-201ENST00000623897 319 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 SNORA43.4-201ENST00000629559 138 ntBASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NLGN3Q9NZ94 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 SNORA72.1-201ENST00000363485 129 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 SNORA3A-201ENST00000364113 130 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 RNU6-1013P-201ENST00000384180 107 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 RNU6-306P-201ENST00000384617 107 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 AL023284.1-201ENST00000403956 276 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 AC098614.3-201ENST00000438957 440 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 AC124916.1-201ENST00000444020 547 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 AL353752.1-201ENST00000454946 260 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 MTND5P5-201ENST00000503764 376 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 AC103851.1-201ENST00000506833 274 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 AC046134.1-201ENST00000514454 666 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 RNU2-53P-201ENST00000516257 147 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 MIR548S-201ENST00000581352 82 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 AC005730.3-201ENST00000583067 366 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 MIR3976-201ENST00000606807 139 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.1□□□□□ -2.07
NLGN3Q9NZ94 MIR5739-201ENST00000619803 80 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms