Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ZNF204P-201ENST00000416749 2397 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 Y_RNA.31-201ENST00000362574 102 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 Y_RNA.112-201ENST00000363250 102 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 Y_RNA.128-201ENST00000363391 112 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 Y_RNA.358-201ENST00000365491 99 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 Y_RNA.364-201ENST00000365532 101 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 RNU6-1072P-201ENST00000384703 107 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 RNU6-443P-201ENST00000384780 107 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 AL357075.1-201ENST00000404107 726 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.57□□□□□ -2
LIN7CQ9NUP9 AC018865.2-201ENST00000423631 129 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 CBX3P6-201ENST00000430257 527 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.57□□□□□ -2
LIN7CQ9NUP9 RNU7-26P-201ENST00000458980 63 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 RNU7-169P-201ENST00000459456 61 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 Y_RNA.631-201ENST00000459607 101 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 AC007215.1-201ENST00000464893 276 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.57□□□□□ -2
LIN7CQ9NUP9 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 RNU6-965P-201ENST00000516721 96 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 RNU7-4P-201ENST00000516961 62 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.57□□□□□ -2
LIN7CQ9NUP9 UBL5P4-201ENST00000562584 236 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 MIR5680-201ENST00000577577 84 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.57□□□□□ -2
LIN7CQ9NUP9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.57□□□□□ -2
LIN7CQ9NUP9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.57□□□□□ -2
LIN7CQ9NUP9 AC091925.1-201ENST00000623204 462 ntBASIC2.57□□□□□ -2
LIN7CQ9NUP9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
LIN7CQ9NUP9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LIN7CQ9NUP9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
LIN7CQ9NUP9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
LIN7CQ9NUP9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.57□□□□□ -2
LIN7CQ9NUP9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
LIN7CQ9NUP9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.56□□□□□ -2
LIN7CQ9NUP9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.56□□□□□ -2
LIN7CQ9NUP9 SNORD115-8-201ENST00000363856 82 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 SNORA38.1-201ENST00000364172 131 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 SNORD115-38-201ENST00000365037 82 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 AL031121.1-201ENST00000406553 254 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 MIR1294-201ENST00000408503 142 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 RNU2-32P-201ENST00000411193 191 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 AC027124.2-201ENST00000428249 105 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 AC096644.2-201ENST00000429278 159 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 WARS2P1-201ENST00000429678 537 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 USP9YP16-201ENST00000430287 407 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.56□□□□□ -2
LIN7CQ9NUP9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.56□□□□□ -2
LIN7CQ9NUP9 AL035666.1-201ENST00000446195 348 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.56□□□□□ -2
LIN7CQ9NUP9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.56□□□□□ -2
LIN7CQ9NUP9 USP9YP23-201ENST00000455085 407 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 RN7SL633P-201ENST00000488974 297 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 ANXA2P1-201ENST00000505539 926 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 RNU6-1198P-201ENST00000516904 67 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 RNA5SP54-201ENST00000516951 92 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 AC018630.3-201ENST00000542637 96 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.56□□□□□ -2
LIN7CQ9NUP9 AC074050.1-201ENST00000563247 211 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.56□□□□□ -2
LIN7CQ9NUP9 MIR2682-201ENST00000580305 110 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.56□□□□□ -2
LIN7CQ9NUP9 AC092447.9-201ENST00000603395 144 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.56□□□□□ -2
LIN7CQ9NUP9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.56□□□□□ -2
LIN7CQ9NUP9 AC135776.4-201ENST00000624300 1904 ntBASIC2.56□□□□□ -2
LIN7CQ9NUP9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.56□□□□□ -2
LIN7CQ9NUP9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
LIN7CQ9NUP9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
LIN7CQ9NUP9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.55□□□□□ -2
LIN7CQ9NUP9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.55□□□□□ -2
LIN7CQ9NUP9 Y_RNA.132-201ENST00000363421 102 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 SNORA18.2-201ENST00000383865 132 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 RNU6-546P-201ENST00000383991 107 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 Y_RNA.557-201ENST00000384680 107 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 MIR561-201ENST00000385216 97 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 SNORA69.1-201ENST00000390904 137 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 MIR887-201ENST00000401258 79 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 MIR548P-201ENST00000408336 84 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 Y_RNA.605-201ENST00000410577 105 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 RNA5SP492-201ENST00000411330 114 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 PMCHL1-202ENST00000423102 261 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 BX322639.1-202ENST00000423987 2213 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.55□□□□□ -2
LIN7CQ9NUP9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.55□□□□□ -2
LIN7CQ9NUP9 U8.22-201ENST00000459141 133 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.55□□□□□ -2
LIN7CQ9NUP9 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 AC109329.2-201ENST00000519658 482 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 AC144568.1-201ENST00000520139 137 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 DEFB131C-201ENST00000528817 165 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.55□□□□□ -2
LIN7CQ9NUP9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.55□□□□□ -2
LIN7CQ9NUP9 AC020661.2-201ENST00000560114 134 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 SNRPGP17-201ENST00000603780 214 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 AC007179.3-201ENST00000604976 235 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 AC096577.2-201ENST00000611455 153 ntBASIC2.55□□□□□ -2
LIN7CQ9NUP9 AC006157.1-201ENST00000611750 366 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms