Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 RNU6-991P-201ENST00000516168 107 ntBASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 PRELID2P1-201ENST00000552837 301 ntBASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 MIR1273D-201ENST00000577266 86 ntBASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 CPDP1-201ENST00000579660 283 ntBASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 CTHRC1P1-201ENST00000605383 469 ntBASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 AL022345.1-201ENST00000607292 135 ntBASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 U1.36-201ENST00000620684 176 ntBASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 MIR6132-201ENST00000622083 109 ntBASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 ZNF658B-202ENST00000615961 3375 ntBASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 AL596028.1-201ENST00000326971 197 ntBASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 RNU4-12P-201ENST00000365233 139 ntBASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 SNORA67.3-201ENST00000384366 140 ntBASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 AL139156.1-201ENST00000412785 841 ntBASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 AL158823.1-201ENST00000418441 478 ntBASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 FTH1P25-201ENST00000447665 469 ntBASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 RPS27P21-201ENST00000486977 252 ntBASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 AC091544.4-201ENST00000555268 342 ntBASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 FGF7P1-201ENST00000582820 288 ntBASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 AC009994.1-201ENST00000606889 253 ntBASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 AC130454.1-201ENST00000622948 401 ntBASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 AL359697.1-201ENST00000624879 587 ntBASIC2.34□□□□□ -2.03
BLOC1S4Q9NUP1 ZNF702P-202ENST00000434269 1966 ntBASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 Y_RNA.6-201ENST00000362350 114 ntBASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 RNU6-1286P-201ENST00000383871 107 ntBASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 RNU6-378P-201ENST00000384324 107 ntBASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 RNU6-332P-201ENST00000391193 108 ntBASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 SNORA11.4-201ENST00000408823 129 ntBASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 RN7SKP32-201ENST00000410167 303 ntBASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 VN1R36P-201ENST00000414936 291 ntBASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 HMGN2P18-201ENST00000450680 270 ntBASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 FAM206BP-201ENST00000510179 541 ntBASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 RPL23AP94-201ENST00000512518 302 ntBASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 AC137590.2-201ENST00000619709 240 ntBASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 AC024614.3-201ENST00000637860 256 ntBASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.33□□□□□ -2.04
BLOC1S4Q9NUP1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 Y_RNA.123-201ENST00000363338 102 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 Y_RNA.157-201ENST00000363638 102 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 RNA5SP160-201ENST00000364866 120 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 Y_RNA.332-201ENST00000365271 113 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 RNU6-438P-201ENST00000365561 103 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 RNU6-968P-201ENST00000384076 107 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 SNORA36A-201ENST00000384221 132 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 Y_RNA.516-201ENST00000384541 124 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 MIR521-1-201ENST00000384902 87 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 RNU11-3P-201ENST00000391111 133 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 RNU2-2P-201ENST00000410396 191 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 RPS26P42-201ENST00000413485 326 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 AL139415.2-201ENST00000431968 163 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 AL353689.1-201ENST00000438895 199 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 RPL23AP7-203ENST00000449021 469 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 RNU5F-4P-201ENST00000516581 114 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 IGKV3-31-201ENST00000523109 329 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 AC104458.1-201ENST00000608243 463 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 AL133215.3-201ENST00000609801 448 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 U2.15-201ENST00000611544 191 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 U2.16-201ENST00000613119 191 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 U2.12-201ENST00000613778 191 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 U2.20-201ENST00000613956 192 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 U2.9-201ENST00000615427 191 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 U2.11-201ENST00000616345 191 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 U2.2-201ENST00000616535 191 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 U2.3-201ENST00000617785 191 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 U2.19-201ENST00000618602 191 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 RNU2-1-201ENST00000618664 191 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 U2.6-201ENST00000619225 191 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 U2.5-201ENST00000619465 191 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 U2.10-201ENST00000620268 191 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 MIR6873-201ENST00000622788 63 ntBASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.32□□□□□ -2.04
BLOC1S4Q9NUP1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 Y_RNA.89-201ENST00000363031 102 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 RNU6-1164P-201ENST00000364428 107 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 Y_RNA.414-201ENST00000384011 101 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 Y_RNA.554-201ENST00000384672 102 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 RNU6-1093P-201ENST00000391194 107 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 AL033519.2-201ENST00000403958 392 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 MIR1283-2-201ENST00000408621 87 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 RNA5SP425-201ENST00000410336 112 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 RNA5SP494-201ENST00000410653 129 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms