Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC012531.5-201ENST00000611375 151 ntBASIC4.24□□□□□ -1.73
ATG3Q9NT62 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.24□□□□□ -1.73
ATG3Q9NT62 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.24□□□□□ -1.73
ATG3Q9NT62 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.24□□□□□ -1.73
ATG3Q9NT62 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.24□□□□□ -1.73
ATG3Q9NT62 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.23□□□□□ -1.73
ATG3Q9NT62 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.23□□□□□ -1.73
ATG3Q9NT62 SNORD6-201ENST00000365444 73 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 RNU6-843P-201ENST00000384454 104 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 Y_RNA.570-201ENST00000384750 101 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 AL031121.1-201ENST00000406553 254 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 RNU6-257P-201ENST00000410238 98 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 AL627311.1-201ENST00000431514 115 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 AC025750.2-201ENST00000442609 450 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.23□□□□□ -1.73
ATG3Q9NT62 AC007395.1-201ENST00000451333 677 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 FABP5P15-201ENST00000453566 214 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 AP000870.1-201ENST00000472927 406 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.23□□□□□ -1.73
ATG3Q9NT62 RNU6-377P-201ENST00000515965 102 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.23□□□□□ -1.73
ATG3Q9NT62 MIR3921-201ENST00000577308 85 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 MIR4782-201ENST00000577987 79 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 MIR4738-201ENST00000579134 87 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG3Q9NT62 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ATG3Q9NT62 AC233981.2-201ENST00000611524 1614 ntBASIC4.23□□□□□ -1.73
ATG3Q9NT62 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
ATG3Q9NT62 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATG3Q9NT62 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ATG3Q9NT62 RNU6-626P-201ENST00000363354 107 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 Y_RNA.136-201ENST00000363444 102 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 Y_RNA.215-201ENST00000364204 112 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 RNA5SP205-201ENST00000364653 136 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 RNU6-514P-201ENST00000384208 107 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 AP000567.1-201ENST00000406413 156 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.22□□□□□ -1.73
ATG3Q9NT62 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG3Q9NT62 AC107083.1-201ENST00000439643 279 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 AC114982.1-201ENST00000469402 321 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 AL049874.1-201ENST00000489560 388 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.22□□□□□ -1.73
ATG3Q9NT62 AC010265.1-201ENST00000513509 211 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 AC008885.1-201ENST00000514930 301 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 SNORA70.19-201ENST00000516717 90 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 MIR2682-201ENST00000580305 110 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.22□□□□□ -1.73
ATG3Q9NT62 U4.7-201ENST00000638126 106 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 AC006504.1-201ENST00000562493 3666 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
ATG3Q9NT62 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG3Q9NT62 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG3Q9NT62 OR4G2P-202ENST00000641004 1759 ntBASIC4.22□□□□□ -1.73
ATG3Q9NT62 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
ATG3Q9NT62 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG3Q9NT62 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATG3Q9NT62 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ATG3Q9NT62 RNU6-653P-201ENST00000363074 106 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 RNU6-961P-201ENST00000363893 105 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 Y_RNA.217-201ENST00000364214 105 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 RNU1-140P-201ENST00000365040 165 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 RNU6-449P-201ENST00000383914 107 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 RNU6-20P-201ENST00000384106 107 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 MIR32-201ENST00000384965 70 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 Y_RNA.597-201ENST00000410463 100 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 AL035461.1-201ENST00000421490 332 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 RPL27AP8-201ENST00000424277 446 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 AC024067.1-201ENST00000426199 223 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 Y_RNA.641-201ENST00000459414 105 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 AC139453.3-201ENST00000493276 369 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG3Q9NT62 SNORD116-25-201ENST00000516517 92 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 RNU6-567P-201ENST00000516746 107 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG3Q9NT62 AC002545.1-201ENST00000592511 181 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 AC093732.2-201ENST00000607950 274 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG3Q9NT62 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 SCARNA4-201ENST00000629045 128 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG3Q9NT62 AL513302.2-201ENST00000562313 1842 ntBASIC4.21□□□□□ -1.74
ATG3Q9NT62 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
ATG3Q9NT62 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
ATG3Q9NT62 RNU6-166P-201ENST00000384371 107 ntBASIC4.2□□□□□ -1.74
ATG3Q9NT62 RNU1-139P-201ENST00000391307 165 ntBASIC4.2□□□□□ -1.74
ATG3Q9NT62 AL357139.1-201ENST00000407792 426 ntBASIC4.2□□□□□ -1.74
ATG3Q9NT62 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG3Q9NT62 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG3Q9NT62 RPS4XP2-201ENST00000458402 793 ntBASIC4.2□□□□□ -1.74
ATG3Q9NT62 snoU109.2-201ENST00000459316 135 ntBASIC4.2□□□□□ -1.74
ATG3Q9NT62 RN7SL330P-201ENST00000469709 307 ntBASIC4.2□□□□□ -1.74
ATG3Q9NT62 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG3Q9NT62 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG3Q9NT62 MIR4672-201ENST00000583126 81 ntBASIC4.2□□□□□ -1.74
ATG3Q9NT62 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG3Q9NT62 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
ATG3Q9NT62 AL137790.1-201ENST00000634283 177 ntBASIC4.2□□□□□ -1.74
ATG3Q9NT62 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG3Q9NT62 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms