Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MFSD8-242ENST00000641690 4199 ntBASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 AL589743.1-201ENST00000551932 2712 ntBASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 RNA5SP189-201ENST00000364920 115 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 SNORA70F-201ENST00000384142 135 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 RNU6-820P-201ENST00000384273 107 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 RNU1-57P-201ENST00000384491 166 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 MIR562-201ENST00000384894 95 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 RNU6-440P-201ENST00000390882 105 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 AL162591.2-201ENST00000449634 317 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 AC010469.1-201ENST00000463864 576 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 RN7SL354P-201ENST00000469282 294 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 RPL27AP5-201ENST00000469428 449 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 AC008897.1-201ENST00000494006 347 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 AC107934.2-201ENST00000518653 310 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 AC209154.1-201ENST00000582156 337 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 AL136360.1-201ENST00000503377 1900 ntBASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.36□□□□□ -1.71
PRDM9Q9NQV7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 Y_RNA.66-201ENST00000362862 102 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 SNORD113.2-201ENST00000364166 89 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 RNU6-117P-201ENST00000365415 107 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 MIR147B-201ENST00000390185 80 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 MIR1283-1-201ENST00000408494 87 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 RNA5SP129-201ENST00000410276 118 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 AC063976.3-201ENST00000426849 329 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 NDUFB1P1-201ENST00000435191 180 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 RBMY2UP-201ENST00000453474 324 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 RNU7-57P-201ENST00000459540 60 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 AC106785.1-201ENST00000565935 262 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 AC091178.1-203ENST00000584586 279 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 RN7SL722P-201ENST00000617780 284 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 RN7SL565P-201ENST00000618246 284 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 AC139713.2-215ENST00000641428 5037 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 AC009487.4-201ENST00000624969 3585 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 AP003122.5-201ENST00000527668 3766 ntBASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PRDM9Q9NQV7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 AL672167.1-203ENST00000641299 2975 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 SNORD32B-201ENST00000364460 84 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 RNA5SP505-201ENST00000364748 108 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 SNORA12-201ENST00000391162 147 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 AC011753.3-201ENST00000443436 406 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 AC245102.2-201ENST00000448956 180 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 AC021205.2-201ENST00000480069 347 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 OR9P1P-201ENST00000496431 281 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 AC005921.1-201ENST00000510589 286 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 RNA5SP446-201ENST00000515955 82 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 MIR4330-201ENST00000579077 105 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 MIR3609-201ENST00000582661 80 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 AL929325.1-201ENST00000603096 117 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 AL035470.1-201ENST00000622571 220 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 AC005086.4-201ENST00000623065 213 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 MFSD8-216ENST00000641147 4009 ntBASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PRDM9Q9NQV7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PRDM9Q9NQV7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
PRDM9Q9NQV7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.33□□□□□ -1.72
PRDM9Q9NQV7 SCN1A-220ENST00000641603 12506 ntBASIC4.33□□□□□ -1.72
PRDM9Q9NQV7 MAPK10-303ENST00000641324 3959 ntBASIC4.33□□□□□ -1.72
PRDM9Q9NQV7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRDM9Q9NQV7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
PRDM9Q9NQV7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PRDM9Q9NQV7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms