Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC016727.1-205ENST00000605437 569 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 SCARNA17.4-201ENST00000614296 143 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 MIR7157-201ENST00000635801 60 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 FO624990.1-201ENST00000636373 85 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.62□□□□□ -1.99
DDX4Q9NQI0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
DDX4Q9NQI0 Y_RNA.61-201ENST00000362835 102 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 RNU6-486P-201ENST00000363116 107 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
DDX4Q9NQI0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
DDX4Q9NQI0 RNU6-692P-201ENST00000384496 107 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 MIR544A-201ENST00000384855 91 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 MIR521-1-201ENST00000384902 87 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 MIR524-201ENST00000385242 87 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 EIF1AXP1-201ENST00000419267 435 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 RPL23AP95-201ENST00000426806 265 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 MICF-203ENST00000432679 129 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 RPL39P29-201ENST00000447779 157 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 AL139109.1-201ENST00000455491 297 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.61□□□□□ -1.99
DDX4Q9NQI0 RNU6-237P-201ENST00000515985 71 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 SNORA31.6-201ENST00000516241 130 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 Y_RNA.675-201ENST00000516389 149 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 Y_RNA.708-201ENST00000516950 96 ntBASIC2.61□□□□□ -1.99
DDX4Q9NQI0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX4Q9NQI0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX4Q9NQI0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX4Q9NQI0 AP000560.1-201ENST00000624150 1937 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 RNU6-306P-201ENST00000384617 107 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 MTCYBP4-201ENST00000401524 249 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 AL591034.2-201ENST00000402839 359 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 RNU6-370P-201ENST00000411008 104 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
DDX4Q9NQI0 MTND3P9-201ENST00000429526 346 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 AL591806.2-201ENST00000433122 173 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.6□□□□□ -1.99
DDX4Q9NQI0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX4Q9NQI0 RPS29P27-201ENST00000463711 170 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 AC008571.1-201ENST00000467232 300 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX4Q9NQI0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 RNU6-307P-201ENST00000516743 106 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX4Q9NQI0 AC016256.1-201ENST00000547971 354 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 AC023824.2-201ENST00000566185 400 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 MIR5690-201ENST00000583739 73 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 AC073410.2-201ENST00000603240 332 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 AC133104.2-201ENST00000615272 193 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 HMGB1P24-202ENST00000615653 685 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 PISRT1.1-201ENST00000616930 107 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 AC009831.4-201ENST00000620744 325 ntBASIC2.6□□□□□ -1.99
DDX4Q9NQI0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
DDX4Q9NQI0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
DDX4Q9NQI0 KPNA2P1-201ENST00000458289 1591 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 SNORD32A-201ENST00000364805 84 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 RNU6-43P-201ENST00000384302 107 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 RNU1-57P-201ENST00000384491 166 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
DDX4Q9NQI0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
DDX4Q9NQI0 AL133475.1-201ENST00000404414 305 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 RN7SKP61-201ENST00000410642 295 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 MTCO2P27-201ENST00000420740 428 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 EIF4EP2-201ENST00000422816 654 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 MTND4P28-201ENST00000426217 387 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 AC078809.1-201ENST00000427601 140 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX4Q9NQI0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX4Q9NQI0 snoU13.23-201ENST00000458863 104 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 snoU13.14-201ENST00000459372 104 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 AC112771.1-201ENST00000463581 102 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 AC026782.1-201ENST00000512952 449 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX4Q9NQI0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.59□□□□□ -1.99
DDX4Q9NQI0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX4Q9NQI0 AC109446.1-201ENST00000566172 220 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 MIR4795-201ENST00000584182 89 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 MIR3976-201ENST00000606807 139 ntBASIC2.59□□□□□ -1.99
DDX4Q9NQI0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -2
DDX4Q9NQI0 MTND4P27-201ENST00000450813 1354 ntBASIC2.59□□□□□ -2
DDX4Q9NQI0 AC009541.1-201ENST00000438279 2662 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 Z75746.1-201ENST00000440243 2080 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.58□□□□□ -2
DDX4Q9NQI0 AC092268.1-201ENST00000342691 405 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 RNU6-784P-201ENST00000384330 106 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 SNORA11.4-201ENST00000408823 129 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 RNU6-1050P-201ENST00000410388 107 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 RNU2-2P-201ENST00000410396 191 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 AC097463.2-201ENST00000421074 142 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 USP9YP30-201ENST00000430729 455 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 AC016632.1-201ENST00000503994 196 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 RNA5SP200-201ENST00000516360 103 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.58□□□□□ -2
DDX4Q9NQI0 AC093027.1-201ENST00000546698 429 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 FRG2DP-202ENST00000566967 323 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.58□□□□□ -2
DDX4Q9NQI0 AC005899.2-201ENST00000584353 90 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms