Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RNU7-63P-201ENST00000459054 62 ntBASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 RNU7-180P-201ENST00000459240 63 ntBASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 AC104564.1-201ENST00000493028 407 ntBASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 RPS23P5-201ENST00000495419 428 ntBASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 AC021146.2-201ENST00000504736 556 ntBASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 RNU6-902P-201ENST00000517212 91 ntBASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 HMGB1P33-201ENST00000563485 527 ntBASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 MIR4435-1-201ENST00000582552 80 ntBASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 RNU6-85P-201ENST00000605989 107 ntBASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 AL353149.1-201ENST00000610667 244 ntBASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 AC087683.2-201ENST00000611384 326 ntBASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 AC136475.10-201ENST00000620253 385 ntBASIC1.04□□□□□ -2.24
SND1-IT1Q9HBX3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 RNU1-62P-201ENST00000362599 164 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 RNU1-42P-201ENST00000364033 160 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 SNORA63D-201ENST00000364359 132 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 RNU5A-6P-201ENST00000384136 116 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 MIR300-201ENST00000401138 83 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 AL049545.1-201ENST00000401856 572 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 RNU6-955P-201ENST00000410497 104 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 ARL5AP1-201ENST00000418991 388 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 AC007098.1-201ENST00000420122 367 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 CETN4P-201ENST00000432407 469 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 AC245047.4-201ENST00000433189 144 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 USP9YP28-201ENST00000435142 589 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 AC099677.2-201ENST00000436385 175 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 HSPE1P9-201ENST00000440046 311 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 HSPE1P24-201ENST00000450782 238 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 RPS29P23-201ENST00000458635 123 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 RPS26P55-201ENST00000471178 356 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 AC026470.2-201ENST00000561492 181 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 AC145350.1-201ENST00000567426 208 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 AP005136.1-201ENST00000579765 429 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 BNIP3P22-201ENST00000593399 556 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 MIR502-201ENST00000606349 86 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 MTND4P23-201ENST00000447723 1363 ntBASIC1.03□□□□□ -2.24
SND1-IT1Q9HBX3 MIR449A-201ENST00000362113 91 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 RNU6-562P-201ENST00000362731 107 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 Y_RNA.159-201ENST00000363674 87 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 SNORA36A-201ENST00000384221 132 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 MIR320A-201ENST00000385302 82 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 RPS26P42-201ENST00000413485 326 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 AC092447.3-201ENST00000426027 686 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 MTND3P7-201ENST00000474435 343 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 FO393415.2-201ENST00000480085 343 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 ICE2P2-201ENST00000483823 2787 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 AC067942.3-201ENST00000512025 362 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 AC010493.1-201ENST00000513479 292 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 LRRC34P1-201ENST00000542742 915 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 MIR4648-201ENST00000580107 72 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 MTATP6P3-201ENST00000581686 676 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 VN1R80P-201ENST00000597126 338 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 uc_338.34-201ENST00000617467 174 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 AL161722.3-201ENST00000605789 2983 ntBASIC1.02□□□□□ -2.25
SND1-IT1Q9HBX3 AC006026.1-201ENST00000444025 1803 ntBASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 Y_RNA.169-201ENST00000363745 96 ntBASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 RNU6-271P-201ENST00000363858 105 ntBASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 RNU6-996P-201ENST00000365438 107 ntBASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 SNORD26-201ENST00000384147 75 ntBASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 MIR1304-201ENST00000408243 91 ntBASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 CST2P1-201ENST00000425770 87 ntBASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 MTCO3P29-201ENST00000432119 779 ntBASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 AL358934.1-201ENST00000432346 324 ntBASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 AL031667.1-201ENST00000440222 725 ntBASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 AC073415.1-201ENST00000449240 153 ntBASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 MTCO2P18-201ENST00000457151 658 ntBASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 AC099513.1-201ENST00000490423 301 ntBASIC1.01□□□□□ -2.25
SND1-IT1Q9HBX3 AC010486.2-201ENST00000505572 483 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms